RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ARHGAP18Q8N392 663 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 ZNF276Q8N554 614 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 KCTD13Q8WZ19 329 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 SHC3Q92529 594 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 NDRG1Q92597 394 aaKnown RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 ATOH1Q92858 354 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 SECISBP2LQ93073 1101 aaKnown RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 CDK5RAP1Q96SZ6 601 aaKnown RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 KLF16Q9BXK1 252 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 ULBP1Q9BZM6 244 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 LRRC4Q9HBW1 653 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 SPATA6Q9NWH7 488 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-223ENST00000591239 TAB2Q9NYJ8 693 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 TBC1D14Q9P2M4 693 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 NUDT5Q9UKK9 219 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 SH3BP1Q9Y3L3 701 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
DNMT1-223ENST00000591239 TRDMT1O14717 391 aaKnown RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 MDM4O15151 490 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 THAP12O43422 761 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 LAMTOR5O43504 91 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 MED7O43513 233 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 GABBR2O75899 941 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 TPM2P07951 284 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 IRF1P10914 325 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 LCP1P13796 627 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 GNA15P30679 374 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 RGS7P49802 495 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 YWHAGP61981 247 aaKnown RBP eCLIP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 GOLGA8FQ08AF8 430 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 GOLGA8DPQ0D2H9 430 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 GRSF1Q12849 480 aaKnown RBP eCLIP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 MTAPQ13126 283 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 CCINQ13939 588 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 LRRC32Q14392 662 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 KRT31Q15323 416 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 TMEM196Q5HYL7 178 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 NAIF1Q69YI7 327 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 DPY19L2P1Q6NXN4 242 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 HTR3DQ70Z44 454 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 BHLHA9Q7RTU4 235 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 MAML2Q8IZL2 1156 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 SIX6OS1Q8N1H7 587 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 SCML4Q8N228 414 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 ZNF606Q8WXB4 792 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 WBP2Q969T9 261 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 OTUB2Q96DC9 234 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 VPS16Q9H269 839 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 CHRDQ9H2X0 955 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 FBRSL1Q9HCM7 1045 aaKnown RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 ACP6Q9NPH0 428 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 CNGB3Q9NQW8 809 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 RBM12Q9NTZ6 932 aaKnown RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 FAM86C1Q9NVL1 165 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 DNAJC12Q9UKB3 198 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 AJAP1Q9UKB5 411 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-223ENST00000591239 CACNA1IQ9P0X4 2223 aa9.65□□□□□ -0.86
DNMT1-223ENST00000591239 YJEFN3A6XGL0 299 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 E7ENQ6 273 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 FOXN3O00409 490 aaPredicted RBP9.64□□□□□ -0.87
DNMT1-223ENST00000591239 PIK3R2O00459 728 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 GREM1O60565 184 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 CYP17A1P05093 508 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 PYGBP11216 843 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 GPD2P43304 727 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 GALK1P51570 392 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 DAOAP59103 153 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 COG7P83436 770 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 EFEMP1Q12805 493 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 GAS6Q14393 721 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 NCAPHQ15003 741 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 DHCR24Q15392 516 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 MEA1Q16626 185 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 ANO6Q4KMQ2 910 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 DGKKQ5KSL6 1271 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 KLHDC7AQ5VTJ3 777 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 BSPRYQ5W0U4 402 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 FSTL4Q6MZW2 842 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 DENND1BQ6P3S1 775 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 RHBDF2Q6PJF5 856 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 MAMSTRQ6ZN01 415 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 RSRC2Q7L4I2 434 aaKnown RBP9.64□□□□□ -0.87
DNMT1-223ENST00000591239 MIB1Q86YT6 1006 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 EXOC4Q96A65 974 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 P2RY13Q9BPV8 354 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 IER2Q9BTL4 223 aa9.64□□□□□ -0.87
DNMT1-223ENST00000591239 NAT10Q9H0A0 1025 aaKnown RBP9.64□□□□□ -0.87
DNMT1-223ENST00000591239 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
DNMT1-223ENST00000591239 LRRC10BA6NIK2 292 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 STC2O76061 302 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 FBXO21O94952 628 aa9.63□□□□□ -0.87
DNMT1-223ENST00000591239 ADH1CP00326 375 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms