RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 CCDC125Q86Z20 511 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 ARHGAP18Q8N392 663 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 MIPOL1Q8TD10 442 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 DCAKDQ8WVC6 231 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 GPR20Q99678 358 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 PHACTR1Q9C0D0 580 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 ACSS3Q9H6R3 686 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.96■□□□□ 0.79
MBD3-207ENST00000590550 GPATCH2LQ9NWQ4 482 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 SENP1Q9P0U3 644 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 AP1B1Q10567 949 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 LRRC6Q86X45 466 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 FBXO16Q8IX29 292 aaPredicted RBP19.96■□□□□ 0.79
MBD3-207ENST00000590550 PDIK1LQ8N165 341 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 CCDC33Q8N5R6 958 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 PTPRHQ9HD43 1115 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 EVPLQ92817 2033 aa19.96■□□□□ 0.79
MBD3-207ENST00000590550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 A0A0G2JND7 137 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 LACTBL1A8MY62 500 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 PHBP35232 272 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 LSAMPQ13449 338 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 DPYSL3Q14195 570 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 MXD4Q14582 209 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 JADE1Q6IE81 842 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 DARS2Q6PI48 645 aaKnown RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 NLRP9Q7RTR0 991 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 SH3TC2Q8TF17 1288 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 MZB1Q8WU39 189 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 MCUR1Q96AQ8 359 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 SPATC1LQ9H0A9 340 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 PENKP01210 267 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 EDNRBP24530 442 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 CDH6P55285 790 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 PTPN11Q06124 597 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 GRM1Q13255 1194 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 KBTBD12Q3ZCT8 623 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 CFAP157Q5JU67 520 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 WDR78Q5VTH9 848 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 EFCAB12Q6NXP0 572 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 ADGRD1Q6QNK2 874 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 TSHZ1Q6ZSZ6 1077 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 CPB2Q96IY4 423 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 SERAC1Q96JX3 654 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 HEXIM2Q96MH2 286 aaKnown RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 RPF1Q9H9Y2 349 aaKnown RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 ZNF510Q9Y2H8 683 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 CFAP69A5D8W1 941 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 KBTBD13C9JR72 458 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 PROZP22891 400 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 YWHAGP61981 247 aaKnown RBP eCLIP19.95■□□□□ 0.78
MBD3-207ENST00000590550 GJC2Q5T442 439 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 PCGF5Q86SE9 256 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 ZNF276Q8N554 614 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 ABTB1Q969K4 478 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 NMD3Q96D46 503 aaKnown RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 PRR11Q96HE9 360 aaPredicted RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 ADPGKQ9BRR6 497 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 TRIM56Q9BRZ2 755 aaKnown RBP19.95■□□□□ 0.78
MBD3-207ENST00000590550 CENPKQ9BS16 269 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 KANSL3Q9P2N6 904 aa19.95■□□□□ 0.78
MBD3-207ENST00000590550 ACKR2O00590 384 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 MCF2LO15068 1137 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 TRUB2O95900 331 aaKnown RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 RGS7P49802 495 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 THOC5Q13769 683 aaKnown RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 DPY19L2Q6NUT2 758 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 IZUMO2Q6UXV1 221 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 RGS9BPQ6ZS82 235 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 VPS52Q8N1B4 723 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 C12orf29Q8N999 325 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.94■□□□□ 0.784e-7■■□□□ 13.8
MBD3-207ENST00000590550 DNAJC1Q96KC8 554 aaKnown RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 TCRBV9S1A1TA0A576 114 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 APOC4-APOC2K7ER74 178 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 B4GALT4O60513 344 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 USP2O75604 605 aaPredicted RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 APOC2P02655 101 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 FAAP100Q0VG06 881 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 SCYL2Q6P3W7 929 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 PRPF39Q86UA1 669 aaKnown RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 APOBEC3FQ8IUX4 373 aaKnown RBP19.94■□□□□ 0.78
MBD3-207ENST00000590550 BANPQ8N9N5 519 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 CFAP36Q96G28 342 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 FAM111AQ96PZ2 611 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 LHX5Q9H2C1 402 aa19.94■□□□□ 0.78
MBD3-207ENST00000590550 FZD9O00144 591 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 GYG2O15488 501 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 MED7O43513 233 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 TTC13Q8NBP0 860 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 NCSTNQ92542 709 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 TTC17Q96AE7 1141 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 HEY1Q9Y5J3 304 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 H7C0C1 242 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 ZWINTO95229 277 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 ATP5OP48047 213 aa19.93■□□□□ 0.78
MBD3-207ENST00000590550 SLC18A1P54219 525 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms