RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 SLC25A11Q02978 314 aaKnown RBP16.35■□□□□ 0.21
MBD1-222ENST00000590208 WASHC5Q12768 1159 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 SNAPC2Q13487 334 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 ITGA9Q13797 1035 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 PIGHQ14442 188 aaPredicted RBP16.35■□□□□ 0.21
MBD1-222ENST00000590208 SEZ6Q53EL9 994 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 ANGEL2Q5VTE6 544 aaKnown RBP16.35■□□□□ 0.21
MBD1-222ENST00000590208 IYDQ6PHW0 289 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 EMC1Q8N766 993 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 JOSD2Q8TAC2 188 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 ZBTB45Q96K62 511 aaPredicted RBP16.35■□□□□ 0.21
MBD1-222ENST00000590208 DTNAQ9Y4J8 743 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 HMX2A2RU54 273 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 LRCH4O75427 683 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 KDELR1P24390 212 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 WDTC1Q8N5D0 677 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 TTC13Q8NBP0 860 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 PPP1R14CQ8TAE6 165 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 SPATA18Q8TC71 538 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 NDUFA13Q9P0J0 144 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 BTAF1O14981 1849 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 DNAJA2O60884 412 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 LYPLA2O95372 231 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 ALDH1A3P47895 512 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 TMED1Q13445 227 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 MTMR1Q13613 665 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 TMEM259Q4ZIN3 620 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 CEP70Q8NHQ1 597 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 FAF2Q96CS3 445 aa16.35■□□□□ 0.21
MBD1-222ENST00000590208 AP1G1O43747 822 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 CD1EP15812 388 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 ITGAXP20702 1163 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 YWHAZP63104 245 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 SH2D4BQ5SQS7 431 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 TRMT10BQ6PF06 316 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 FRMD7Q6ZUT3 714 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 MAVSQ7Z434 540 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 ADGRF2Q8IZF7 708 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 HSPH1Q92598 858 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 DCUN1D1Q96GG9 259 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 CNBD2Q96M20 576 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 CALN1Q9BXU9 219 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 ZC3H7BQ9UGR2 993 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.219e-6■■■■■ 68.9
MBD1-222ENST00000590208 TTLL13PA6NNM8 815 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 MAP3K6O95382 1288 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 CALB1P05937 261 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 TSHRP16473 764 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 DESP17661 470 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 KCNA4P22459 653 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 KCNJ11Q14654 390 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 DARS2Q6PI48 645 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 PHTF2Q8N3S3 785 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 ACTRT2Q8TDY3 377 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 HAPLN2Q9GZV7 340 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 RBM38Q9H0Z9 239 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 RAB6BQ9NRW1 208 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 THAP1Q9NVV9 213 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
MBD1-222ENST00000590208 GMEB1Q9Y692 573 aa16.34■□□□□ 0.21
MBD1-222ENST00000590208 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 ADCY3O60266 1144 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 COQ9O75208 318 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 MAGEA10P43363 369 aaPredicted RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 ADARP55265 1226 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 XIAPP98170 497 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 PSMD6Q15008 389 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 FASTKD1Q53R41 847 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 WDR75Q8IWA0 830 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 PIP4K2CQ8TBX8 421 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 PIWIL2Q8TC59 973 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 CEP170P1Q96L14 293 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 PRPF18Q99633 342 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 PNPOQ9NVS9 261 aa16.33■□□□□ 0.21
MBD1-222ENST00000590208 HEMK1Q9Y5R4 338 aaPredicted RBP16.33■□□□□ 0.21
MBD1-222ENST00000590208 MCF2LO15068 1137 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 EXTL3O43909 919 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 CCDC166P0CW27 439 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 NCF2P19878 526 aaPredicted RBP16.33■□□□□ 0.2
MBD1-222ENST00000590208 GARTP22102 1010 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 MSX2P35548 267 aaPredicted RBP16.33■□□□□ 0.2
MBD1-222ENST00000590208 LIG4P49917 911 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 KLC3Q6P597 504 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 KBTBD6Q86V97 674 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 KCTD6Q8NC69 237 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 GAB3Q8WWW8 586 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 BTBD9Q96Q07 612 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
MBD1-222ENST00000590208 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
MBD1-222ENST00000590208 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms