RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 WBP2Q969T9 261 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 DUSP16Q9BY84 665 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 DEC1Q9P2X7 70 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 USP3Q9Y6I4 520 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 KIAA1549LQ6ZVL6 1849 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 BCLAF3A2AJT9 711 aaKnown RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 SGK1O00141 431 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 KLF8O95600 359 aaPredicted RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 TBX18O95935 607 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 EPB41P11171 864 aaKnown RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 HNRNPLP14866 589 aaKnown RBP eCLIP12.88□□□□□ -0.35
VAT1-206ENST00000589709 CD58P19256 250 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 TIE1P35590 1138 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 MXI1P50539 228 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 PMS2CLQ68D20 193 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 TADA2BQ86TJ2 420 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 SFTPA1Q8IWL2 248 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 POLMQ9NP87 494 aaPredicted RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.88□□□□□ -0.356e-6■■■□□ 15
VAT1-206ENST00000589709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
VAT1-206ENST00000589709 OSER1Q9NX31 292 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 CLIC5Q9NZA1 410 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 MARK1Q9P0L2 795 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
VAT1-206ENST00000589709 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 MYO16Q9Y6X6 1858 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 EML5Q05BV3 1969 aa12.88□□□□□ -0.35
VAT1-206ENST00000589709 MYOFQ9NZM1 2061 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 CYP26A1O43174 497 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ADAM23O75077 832 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 CAVIN2O95810 425 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ADRB1P08588 477 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 RARGP13631 454 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 GBP1P32455 592 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 PRCPP42785 496 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 FKBP3Q00688 224 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 KDSRQ06136 332 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 PNOCQ13519 176 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 BECN1Q14457 450 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 CCDC6Q16204 474 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ANO4Q32M45 955 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 PPM1JQ5JR12 505 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 STPG1Q5TH74 334 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ZNF658Q5TYW1 1059 aaPredicted RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 ARHGAP17Q68EM7 881 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 IL31Q6EBC2 164 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 TRMT11Q7Z4G4 463 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 SCD5Q86SK9 330 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 SMYD4Q8IYR2 804 aaPredicted RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 TERB1Q8NA31 727 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 TMEM176AQ96HP8 235 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 HEXIM2Q96MH2 286 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 MMRN2Q9H8L6 949 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 RXFP3Q9NSD7 469 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 CISHQ9NSE2 258 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 COQ4Q9Y3A0 265 aa12.87□□□□□ -0.35
VAT1-206ENST00000589709 CNOT1A5YKK6 2376 aaKnown RBP12.87□□□□□ -0.35
VAT1-206ENST00000589709 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
VAT1-206ENST00000589709 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
VAT1-206ENST00000589709 CACNG3O60359 315 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 SMC2O95347 1197 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 IRF1P10914 325 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 RALAP11233 206 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 P2RY2P41231 377 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 RAD23BP54727 409 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 CREB5Q02930 508 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 BYSLQ13895 437 aaKnown RBP12.86□□□□□ -0.35
VAT1-206ENST00000589709 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 GRAMD4Q6IC98 578 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 Q6ZNB5 142 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 SLC4A11Q8NBS3 891 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 JAKMIP2Q96AA8 810 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 EEF2KMTQ96G04 330 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms