RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 GDF15Q99988 308 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 TMEM79Q9BSE2 394 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 HERPUD2Q9BSE4 406 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 QTRT1Q9BXR0 403 aaKnown RBP4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ACTRT3Q9BYD9 372 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 STK33Q9BYT3 514 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 MAGEB5Q9BZ81 275 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 VPS16Q9H269 839 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 SMOC2Q9H3U7 446 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 ARHGEF3Q9NR81 526 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 DKK4Q9UBT3 224 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 SERGEFQ9UGK8 458 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 MAGED2Q9UNF1 606 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-207ENST00000589076 FER1L4A9Z1Z3 1794 aa4.11□□□□□ -1.75
SMAD4-207ENST00000589076 AQP7P3A6NL99 342 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 VWC2LB2RUY7 222 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 RAB27BO00194 218 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 KCNQ3O43525 872 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 RHOP08100 348 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 TPH1P17752 444 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 CHRM3P20309 590 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 TRAPPC10P48553 1259 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 NDUFV1P49821 464 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF134P52741 427 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ICA1Q05084 483 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 E2F2Q14209 437 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 TRIP6Q15654 476 aaKnown RBP4.1□□□□□ -1.75
SMAD4-207ENST00000589076 SUPT20HL1Q3ZLR7 823 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 RRAGBQ5VZM2 374 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 PLAG1Q6DJT9 500 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 FCRL6Q6DN72 434 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ANKRD16Q6P6B7 361 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 USP17L6PQ6QN14 398 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 TMEM108Q6UXF1 575 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF66Q6ZN08 573 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF280BQ86YH2 543 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 PPP2R3CQ969Q6 453 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 LRRC46Q96FV0 321 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 SNX27Q96L92 541 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 PPCSQ9HAB8 311 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 NECTIN3Q9NQS3 549 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF580Q9UK33 172 aa4.1□□□□□ -1.75
SMAD4-207ENST00000589076 hCG_1642624A0A1W2PR95 340 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 KCNU1A8MYU2 1149 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 PRRT4C9JH25 899 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 H7C4K7 107 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 SKAP2O75563 359 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 TOP3BO95985 862 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 KCNA3P22001 575 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 PPIFP30405 207 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 NR4A2P43354 598 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 MYO1EQ12965 1108 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 TRIM14Q14142 442 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 PUM3Q15397 648 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF750Q32MQ0 723 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 CEP78Q5JTW2 689 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 AARS2Q5JTZ9 985 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 ZNF618Q5T7W0 954 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 ICE2Q659A1 982 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 FBXO38Q6PIJ6 1188 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 SLC2A7Q6PXP3 512 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 BPIFB1Q8TDL5 484 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 SH2D3AQ9BRG2 576 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 TRIM5Q9C035 493 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 AMBRA1Q9C0C7 1298 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 HEYLQ9NQ87 328 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 DNMT3BQ9UBC3 853 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 SLC39A10Q9ULF5 831 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 NDRG4Q9ULP0 352 aaKnown RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-207ENST00000589076 CDY1Q9Y6F8 540 aa4.09□□□□□ -1.75
SMAD4-207ENST00000589076 hCG_1984214I3L0E3 225 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 RGS10O43665 173 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 RRP9O43818 475 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 NDST3O95803 873 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 SCP2P22307 547 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 GABRB3P28472 473 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 CD6P30203 668 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 HALP42357 657 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 PRKAG1P54619 331 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 EEFSECP57772 596 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 BLMHQ13867 455 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 RABEP1Q15276 862 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ELF2Q15723 593 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ZIK1Q3SY52 487 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 INO80DQ53TQ3 878 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 RBM20Q5T481 1227 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ANO1Q5XXA6 986 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 ARL6IP4Q66PJ3 421 aaKnown RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-207ENST00000589076 MIS18BP1Q6P0N0 1132 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 MZT2AQ6P582 158 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 KIAA0408Q6ZU52 694 aa4.08□□□□□ -1.76
SMAD4-207ENST00000589076 WDR53Q7Z5U6 358 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms