RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PPP1R15BQ5SWA1 713 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 SYCE2Q6PIF2 218 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 BHLHA9Q7RTU4 235 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 ZNF564Q8TBZ8 553 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 CLEC4CQ8WTT0 213 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 LRRC3Q9BY71 257 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 IL21Q9HBE4 155 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 ZNF334Q9HCZ1 680 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 CLEC1BQ9P126 229 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 DNMT3BQ9UBC3 853 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 TMEM59LQ9UK28 342 aa17.76■□□□□ 0.43
SCAMP4-211ENST00000588907 A0A1W2PQH9 124 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 F11P03951 625 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 MYL4P12829 197 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 NCAM1P13591 858 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 SDC4P31431 198 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 ACAP1Q15027 740 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 HECTD3Q5T447 861 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 EP400NLQ6ZTU2 488 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 RSRC2Q7L4I2 434 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 GRASPQ7Z6J2 395 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 RNF10Q8N5U6 811 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 MSLNLQ96KJ4 702 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 MCEEQ96PE7 176 aa17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 WDR6Q9NNW5 1121 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
SCAMP4-211ENST00000588907 TMEM191CA6NGB0 347 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 C2CD4BA6NLJ0 364 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 MYO1FO00160 1098 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 DPYSL4O14531 572 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 ATMINO43313 823 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 TLR5O60602 858 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 RARGP13631 454 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 GBP1P32455 592 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 PTPN9P43378 593 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 KPNA1P52294 538 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 NNTQ13423 1086 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 PIGHQ14442 188 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 MSANTD2Q6P1R3 559 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 GAREM2Q75VX8 874 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 SCD5Q86SK9 330 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 C12orf76Q8N812 135 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 SMRP1Q8NCR6 262 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 ARHGEF26Q96DR7 871 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 PIWIL1Q96J94 861 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 CNPY3Q9BT09 278 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 NACA2Q9H009 215 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 ATXN3LQ9H3M9 355 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 KCND1Q9NSA2 647 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 CHORDC1Q9UHD1 332 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 IP6K2Q9UHH9 426 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 CD207Q9UJ71 328 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 ANAPC7Q9UJX3 599 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 COG5Q9UP83 839 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 MRPS23Q9Y3D9 190 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 PAXBP1Q9Y5B6 917 aa17.74■□□□□ 0.43
SCAMP4-211ENST00000588907 TADA3O75528 432 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 ABL1P00519 1130 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 PDGFRAP16234 1089 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 GPD1P21695 349 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 LTBRP36941 435 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 NOP2P46087 812 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 ZNF143P52747 638 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 MTA1Q13330 715 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 SKIV2LQ15477 1246 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 SLC25A52Q3SY17 297 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 DCAF6Q58WW2 860 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 PRSS36Q5K4E3 855 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 DNAAF5Q86Y56 855 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 HS6ST3Q8IZP7 471 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 S1PR5Q9H228 398 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 SMOC2Q9H3U7 446 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 UBE2ZQ9H832 354 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 NMUR1Q9HB89 426 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 HCFC1R1Q9NWW0 138 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 DNMT3LQ9UJW3 386 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 OBSL1O75147 1896 aa17.73■□□□□ 0.43
SCAMP4-211ENST00000588907 DENND4CQ5VZ89 1909 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 TRAV19A0A0A6YYK7 116 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 A0A1W2PRU2 124 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 FAM170AA1A519 330 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 GRAP2O75791 330 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 F9P00740 461 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 OAS1P00973 400 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 FSHRP23945 695 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 MAN1A1P33908 653 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 RFC1P35251 1148 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 FLT3P36888 993 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 C10orf120Q5SQS8 335 aa17.72■□□□□ 0.43
SCAMP4-211ENST00000588907 HFE2Q6ZVN8 426 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms