RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 PRICKLE3O43900 615 aaPredicted RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 SDC3O75056 442 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 CSTF2P33240 577 aaKnown RBP eCLIP7.43□□□□□ -1.22
TPM4-210ENST00000588507 CLCN1P35523 988 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 TRAPPC10P48553 1259 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 GNAQP50148 359 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 ADCY7P51828 1080 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 EIF3IQ13347 325 aaKnown RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 C14orf28Q4W4Y0 310 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SLC45A4Q5BKX6 768 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 TCTN3Q6NUS6 607 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 ASB18Q6ZVZ8 466 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 CYB5R4Q7L1T6 521 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 DHX32Q7L7V1 743 aaKnown RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 ZFAND4Q86XD8 727 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 CACUL1Q86Y37 369 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SLC25A45Q8N413 288 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SRBD1Q8N5C6 995 aaKnown RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 FSIP1Q8NA03 581 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SPPL2BQ8TCT7 592 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 ASAP3Q8TDY4 903 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 C2orf15Q8WU43 125 aaKnown RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 MAP3K14Q99558 947 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 SENP2Q9HC62 589 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 CYLDQ9NQC7 956 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 TBC1D14Q9P2M4 693 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 NOTCH1P46531 2555 aa7.43□□□□□ -1.22
TPM4-210ENST00000588507 DIDO1Q9BTC0 2240 aaKnown RBP7.43□□□□□ -1.22
TPM4-210ENST00000588507 SCAMP3O14828 347 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 DKC1O60832 514 aaKnown RBP eCLIP7.42□□□□□ -1.22
TPM4-210ENST00000588507 IGHV4-34P06331 123 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 HARS2P49590 506 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 COPAP53621 1224 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 YARSP54577 528 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 NAPAP54920 295 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 RNASE9P60153 205 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 SMARCB1Q12824 385 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 DCAF4L1Q3SXM0 396 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 XKR4Q5GH76 650 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 ATF7IP2Q5U623 682 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 KIAA0895LQ68EN5 471 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 ALKAL1Q6UXT8 129 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 RAB11FIP2Q7L804 512 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 DSG4Q86SJ6 1040 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 ZNF589Q86UQ0 364 aaPredicted RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 SLC5A5Q92911 643 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 APOLD1Q96LR9 279 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 FAM227BQ96M60 508 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 DRC1Q96MC2 740 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 SGPP1Q9BX95 441 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 GLT8D2Q9H1C3 349 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 LHX5Q9H2C1 402 aa7.42□□□□□ -1.22
TPM4-210ENST00000588507 TOPORSQ9NS56 1045 aaPredicted RBP7.42□□□□□ -1.22
TPM4-210ENST00000588507 COL27A1Q8IZC6 1860 aaPredicted RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 CROCCQ5TZA2 2017 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 A0A0D9SFI3 127 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 A0A1W2PQ27 194 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 A0A1W2PQ64 194 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 A0A1W2PQC6 194 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 SMCO2A6NFE2 343 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 ZNF891A8MT65 544 aaPredicted RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 K7EM74 188 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 NPC1O15118 1278 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 FFAR2O15552 330 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 NOL4O94818 638 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 PLEKHA8P1O95397 391 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 ALPPL2P10696 532 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 BPIP17213 487 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 PFKLP17858 780 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 TYMPP19971 482 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 GLRA2P23416 452 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 CIITAP33076 1130 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 ART1P52961 327 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 PRPF4BQ13523 1007 aaKnown RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 ANO4Q32M45 955 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 ZRANB3Q5FWF4 1079 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 DSTYKQ6XUX3 929 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 OTUD6AQ7L8S5 288 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 CCDC13Q8IYE1 715 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 STKLD1Q8NE28 680 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 C18orf25Q96B23 403 aaPredicted RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 LENG9Q96B70 501 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 OTUB2Q96DC9 234 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 ZMAT2Q96NC0 199 aaKnown RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 TRIM9Q9C026 710 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 SGK2Q9HBY8 427 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 XPNPEP1Q9NQW7 623 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 DNAJC17Q9NVM6 304 aaKnown RBP7.41□□□□□ -1.22
TPM4-210ENST00000588507 TTC41PQ6P2S7 1318 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 PLXNA2O75051 1894 aa7.41□□□□□ -1.22
TPM4-210ENST00000588507 LY6G6EA0A0G2JKS1 128 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 PRAMEF33A0A0G2JMD5 474 aa7.4□□□□□ -1.22
TPM4-210ENST00000588507 MKRN2OSH3BPM6 223 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms