RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 TJP3O95049 919 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 RARBP10826 455 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 KCNE1P15382 129 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 CYP3A5P20815 502 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 PNPLA4P41247 253 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 CARSP49589 748 aaKnown RBP10.05□□□□□ -0.8
LINC01539-201ENST00000587904 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
LINC01539-201ENST00000587904 CNGA2Q16280 664 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 SGO2Q562F6 1265 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
LINC01539-201ENST00000587904 XKR4Q5GH76 650 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 GRAMD4Q6IC98 578 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 LONP2Q86WA8 852 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 ANKRD13BQ86YJ7 626 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 SCUBE1Q8IWY4 988 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 FNIP1Q8TF40 1166 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 GATA6Q92908 595 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 ZNF333Q96JL9 665 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 ZNF560Q96MR9 790 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 CELF4Q9BZC1 486 aaKnown RBP10.05□□□□□ -0.8
LINC01539-201ENST00000587904 ELOVL4Q9GZR5 314 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 CCDC134Q9H6E4 229 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 NFU1Q9UMS0 254 aa10.05□□□□□ -0.8
LINC01539-201ENST00000587904 PODXLO00592 558 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 KDM1AO60341 852 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 UBOX5O94941 541 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 S100A1P23297 94 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 CETN2P41208 172 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 FLT3LGP49771 235 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 PMS2P54278 862 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 DRG2P55039 364 aaKnown RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 CDH8P55286 799 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 MRPS6P82932 125 aaKnown RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 OCRLQ01968 901 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 ITGA7Q13683 1181 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 GNASQ5JWF2 1037 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 WASHC2DQ5SRD0 308 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 NEPROQ6NW34 567 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 DENND1BQ6P3S1 775 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 DCUN1D2Q6PH85 259 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 UNC93AQ86WB7 457 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 PRELID2Q8N945 189 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 EXD1Q8NHP7 514 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 DIS3LQ8TF46 1054 aaKnown RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 RNF25Q96BH1 459 aaPredicted RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 HNRNPABQ99729 332 aaKnown RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
LINC01539-201ENST00000587904 N6AMT1Q9Y5N5 214 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 TRPV2Q9Y5S1 764 aa10.04□□□□□ -0.8
LINC01539-201ENST00000587904 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ZSCAN5CA6NGD5 496 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 O00370 1275 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 TTI1O43156 1089 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 PEX11AO75192 247 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CST5P28325 142 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 GABRB2P47870 512 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CLCN2P51788 898 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 NDST1P52848 882 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MUM1Q2TAK8 710 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 PDCD4Q53EL6 469 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 C2CD6Q53TS8 623 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 UBXN11Q5T124 520 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 HACE1Q8IYU2 909 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 WDTC1Q8N5D0 677 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 C18orf8Q96DM3 657 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MCEEQ96PE7 176 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 TWNKQ96RR1 684 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ERVK-5Q9HDB9 667 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 NDUFA13Q9P0J0 144 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 TBC1D30Q9Y2I9 924 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SIGLEC16A6NMB1 481 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 A8MUI8 341 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 H0YGN5 161 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 M0QYV0 167 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MICAL2O94851 1124 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CCNB1P14635 433 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 VHLP40337 213 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 GUCY2FP51841 1108 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ADARP55265 1226 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ZNF200P98182 395 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MTMR3Q13615 1198 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 HLTFQ14527 1009 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 FAAH2Q6GMR7 532 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 LLGL2Q6P1M3 1020 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 DUS1LQ6P1R4 473 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 LCLAT1Q6UWP7 414 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms