RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 RING1Q06587 406 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 EHHADHQ08426 723 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 ACOT1Q86TX2 421 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 HDDC3Q8N4P3 179 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 CHCHD4Q8N4Q1 142 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 MINDY1Q8N5J2 469 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 DHX58Q96C10 678 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 SMOQ99835 787 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 C7orf25Q9BPX7 421 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 SLC6A17Q9H1V8 727 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 VRTNQ9H8Y1 702 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 CD93Q9NPY3 652 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 CYP8B1Q9UNU6 501 aa17.29■□□□□ 0.36
NPC1-205ENST00000587163 PRRT4C9JH25 899 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 TAF4O00268 1085 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 ARHGAP33O14559 1287 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 PHACTR2O75167 634 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 AP1G2O75843 785 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 ORC1Q13415 861 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 STK38Q15208 465 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 PREPLQ4J6C6 727 aaPredicted RBP17.28■□□□□ 0.36
NPC1-205ENST00000587163 GRAMD4Q6IC98 578 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 SCARA5Q6ZMJ2 495 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 TOGARAM2Q6ZUX3 1019 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 HTR3DQ70Z44 454 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 TRIML1Q8N9V2 468 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
NPC1-205ENST00000587163 SMARCD1Q96GM5 515 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 CAMK1GQ96NX5 476 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 KLF16Q9BXK1 252 aaPredicted RBP17.28■□□□□ 0.36
NPC1-205ENST00000587163 CUEDC2Q9H467 287 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 DNAJC17Q9NVM6 304 aaKnown RBP17.28■□□□□ 0.36
NPC1-205ENST00000587163 COMMD8Q9NX08 183 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 TFIP11Q9UBB9 837 aaKnown RBP17.28■□□□□ 0.36
NPC1-205ENST00000587163 RAD54BQ9Y620 910 aa17.28■□□□□ 0.36
NPC1-205ENST00000587163 ATP8B3O60423 1300 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 FAM221BA6H8Z2 402 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 NEDD8-MDP1E9PL57 170 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 TLR5O60602 858 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 VNN1O95497 513 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 CAPNS1P04632 268 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 CCDC130P13994 396 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 TYRP14679 529 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.36
NPC1-205ENST00000587163 AMPD3Q01432 767 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 ZNF699Q32M78 642 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 TPGS1Q6ZTW0 290 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 CHPFQ8IZ52 775 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 TNIP3Q96KP6 325 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 HSPA12BQ96MM6 686 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 GABRG3Q99928 467 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 NACA2Q9H009 215 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 SLC39A2Q9NP94 309 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 KRT82Q9NSB4 513 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 OSER1Q9NX31 292 aa17.27■□□□□ 0.36
NPC1-205ENST00000587163 UBE4BO95155 1302 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 WASH3PC4AMC7 463 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 SPTLC2O15270 562 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 CACNG3O60359 315 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 C4BPAP04003 597 aaKnown RBP17.26■□□□□ 0.35
NPC1-205ENST00000587163 MAP3K7CLP57077 242 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 BIRC3Q13489 604 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 NCOA4Q13772 614 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 ZNF667Q5HYK9 610 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 SHC4Q6S5L8 630 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 UNC13DQ70J99 1090 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 GPRIN1Q7Z2K8 1008 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 RABEPKQ7Z6M1 372 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 RAB44Q7Z6P3 723 aaPredicted RBP17.26■□□□□ 0.35
NPC1-205ENST00000587163 C12orf56Q8IXR9 622 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 IQUBQ8NA54 791 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 SLC2A14Q8TDB8 520 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 PARD3BQ8TEW8 1205 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 P2RY11Q96G91 374 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 ZNF419Q96HQ0 510 aaPredicted RBP17.26■□□□□ 0.35
NPC1-205ENST00000587163 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
NPC1-205ENST00000587163 CSNK1G1Q9HCP0 422 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 DNAAF2Q9NVR5 837 aaKnown RBP17.26■□□□□ 0.35
NPC1-205ENST00000587163 HMGXB4Q9UGU5 601 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 LHX6Q9UPM6 363 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 NBEAQ8NFP9 2946 aa17.26■□□□□ 0.35
NPC1-205ENST00000587163 A0A1W2PQD8 194 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
NPC1-205ENST00000587163 H0Y626 953 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 SH3BP5O60239 455 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 EXOC3O60645 756 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 ZNF217O75362 1048 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 GJB3O75712 270 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 TRIM16O95361 564 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 MAOBP27338 520 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 CLDN10P78369 228 aa17.25■□□□□ 0.35
NPC1-205ENST00000587163 KNOP1Q1ED39 458 aaKnown RBP17.25■□□□□ 0.35
NPC1-205ENST00000587163 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms