RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 CETN1Q12798 172 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 GRSF1Q12849 480 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 EML3Q32P44 896 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TCERG1LQ5VWI1 586 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 ARHGAP17Q68EM7 881 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 KLHDC10Q6PID8 442 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 CLEC20AQ6ZU45 233 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TMEM139Q8IV31 216 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 ADGRG2Q8IZP9 1017 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 C12orf29Q8N999 325 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TMEM176AQ96HP8 235 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 DUSP16Q9BY84 665 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
ERCC2-207ENST00000586441 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 HMGXB4Q9UGU5 601 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 SCML2Q9UQR0 700 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 COL4A3Q01955 1670 aa13.05□□□□□ -0.32
ERCC2-207ENST00000586441 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 HHLA1C9JL84 531 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 LEFTY2O00292 366 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 BEST1O76090 585 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 TDGF1P13385 188 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CCDC130P13994 396 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 FECHP22830 423 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CNR2P34972 360 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 GJA4P35212 333 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 EIF2DP41214 584 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 FMO5P49326 533 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 ADKP55263 362 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 ZXDBP98169 803 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 MAN2A1Q16706 1144 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CBWD6Q4V339 395 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CBWD3Q5JTY5 395 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CBWD5Q5RIA9 395 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 TMTC1Q8IUR5 882 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 MYRIPQ8NFW9 859 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 ATRIPQ8WXE1 791 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 HEXIM2Q96MH2 286 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 FAM49BQ9NUQ9 324 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 TRMT1Q9NXH9 659 aaKnown RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
ERCC2-207ENST00000586441 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
ERCC2-207ENST00000586441 CCDC163A0A0D9SF12 145 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CHURC1-FNTBB4DL54 471 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 COCHO43405 550 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ABL1P00519 1130 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 GYPCP04921 128 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ARSAP15289 507 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CASP14P31944 242 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 SOX9P48436 509 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 KIF11P52732 1056 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 RAD23BP54727 409 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 SLC8A3P57103 927 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 PON2Q15165 354 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 TRIM68Q6AZZ1 485 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 TRIM59Q8IWR1 403 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
ERCC2-207ENST00000586441 TATDN2Q93075 761 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 JAKMIP2Q96AA8 810 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ELMO3Q96BJ8 720 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 ERGIC2Q96RQ1 377 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CDK5RAP1Q96SZ6 601 aaKnown RBP13.03□□□□□ -0.32
ERCC2-207ENST00000586441 P2RY13Q9BPV8 354 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 LUC7L2Q9Y383 392 aaKnown RBP13.03□□□□□ -0.32
ERCC2-207ENST00000586441 CPQQ9Y646 472 aa13.03□□□□□ -0.32
ERCC2-207ENST00000586441 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
ERCC2-207ENST00000586441 A0A0A0MRY4 1105 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 DYNC1I1O14576 645 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
ERCC2-207ENST00000586441 CD58P19256 250 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 ADORA2BP29275 332 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 KRT9P35527 623 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
ERCC2-207ENST00000586441 GALK1P51570 392 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 CUL2Q13617 745 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 GAS6Q14393 721 aa13.02□□□□□ -0.33
ERCC2-207ENST00000586441 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms