RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 TXNDC8Q6A555 127 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 RAD9BQ6WBX8 426 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 HFE2Q6ZVN8 426 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 NACA2Q9H009 215 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 TASP1Q9H6P5 420 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 NMUR1Q9HB89 426 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 POPDC2Q9HBU9 364 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 METTL5Q9NRN9 209 aaKnown RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 OLA1Q9NTK5 396 aaKnown RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 PARVAQ9NVD7 372 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
VMP1-203ENST00000586245 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.13
VMP1-203ENST00000586245 THEGQ9P2T0 379 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 NENFQ9UMX5 172 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 SCINQ9Y6U3 715 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 SPTBN5Q9NRC6 3674 aaKnown RBP14.27□□□□□ -0.13
VMP1-203ENST00000586245 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 MYO16Q9Y6X6 1858 aa14.27□□□□□ -0.13
VMP1-203ENST00000586245 TRAV19A0A0A6YYK7 116 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 ARHGAP6O43182 974 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 GRAP2O75791 330 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 LCA5LO95447 670 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 KRT3P12035 628 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 NCAM1P13591 858 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 RRM1P23921 792 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
VMP1-203ENST00000586245 ATP5C1P36542 298 aaKnown RBP14.26□□□□□ -0.13
VMP1-203ENST00000586245 AVPR1AP37288 418 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 MAGEA1P43355 309 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 PGFP49763 221 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 GALCP54803 685 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 KRT83P78385 493 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 TAF5Q15542 800 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 C10orf120Q5SQS8 335 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 BEND5Q7L4P6 421 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 MAB21L3Q8N8X9 362 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 EDEM1Q92611 657 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 FGF13Q92913 245 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 ACSF2Q96CM8 615 aaPredicted RBP14.26□□□□□ -0.13
VMP1-203ENST00000586245 PIWIL1Q96J94 861 aaKnown RBP14.26□□□□□ -0.13
VMP1-203ENST00000586245 THAP2Q9H0W7 228 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 CCSER2Q9H7U1 834 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 MRPL47Q9HD33 250 aaKnown RBP14.26□□□□□ -0.13
VMP1-203ENST00000586245 OSER1Q9NX31 292 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 GDE1Q9NZC3 331 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 CDH7Q9ULB5 785 aa14.26□□□□□ -0.13
VMP1-203ENST00000586245 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 C2orf78A6NCI8 922 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 NRG2O14511 850 aaPredicted RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 ZNF263O14978 683 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 DAB1O75553 588 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 OAS1P00973 400 aaKnown RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 CKMP06732 381 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 TMEM253P0C7T8 217 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 HDCP19113 662 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 TFF2Q03403 129 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 SMAD2Q15796 467 aaKnown RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 STXBP5Q5T5C0 1151 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 DCUN1D2Q6PH85 259 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 OTOP3Q7RTS5 596 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 TXLNBQ8N3L3 684 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 ZNF276Q8N554 614 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 ARL14EPQ8N8R7 260 aaPredicted RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 SLC2A13Q96QE2 648 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 PHF7Q9BWX1 381 aaPredicted RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 SLC46A2Q9BY10 475 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
VMP1-203ENST00000586245 INTUQ9ULD6 942 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
VMP1-203ENST00000586245 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
VMP1-203ENST00000586245 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 SIGLEC16A6NMB1 481 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 COCHO43405 550 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 CYP1A2P05177 515 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 MBL2P11226 248 aaPredicted RBP14.24□□□□□ -0.13
VMP1-203ENST00000586245 DESP17661 470 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 NOS2P35228 1153 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 MATKP42679 507 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 CCZ1BP86790 482 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 CCZ1P86791 482 aaPredicted RBP14.24□□□□□ -0.13
VMP1-203ENST00000586245 DCAF6Q58WW2 860 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 KLHDC10Q6PID8 442 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 ARCQ7LC44 396 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 CMTM8Q8IZV2 173 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 DEFB106AQ8N104 65 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 TDRD5Q8NAT2 981 aaKnown RBP14.24□□□□□ -0.13
VMP1-203ENST00000586245 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.13
VMP1-203ENST00000586245 MCEEQ96PE7 176 aa14.24□□□□□ -0.13
VMP1-203ENST00000586245 MYADMQ96S97 322 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms