RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 DDX42Q86XP3 938 aaKnown RBP eCLIP20.7■□□□□ 0.93e-8■□□□□ 9.2
PTBP1-208ENST00000585956 SYT12Q8IV01 421 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 SLC41A1Q8IVJ1 513 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 PGBD3Q8N328 593 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 ZNF513Q8N8E2 541 aaPredicted RBP20.7■□□□□ 0.9
PTBP1-208ENST00000585956 TERB1Q8NA31 727 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 IQUBQ8NA54 791 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 KIAA0895Q8NCT3 520 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 OVCA2Q8WZ82 227 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 SYAP1Q96A49 352 aaPredicted RBP20.7■□□□□ 0.9
PTBP1-208ENST00000585956 DMAP1Q9NPF5 467 aaPredicted RBP20.7■□□□□ 0.9
PTBP1-208ENST00000585956 FAM49BQ9NUQ9 324 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 TBC1D14Q9P2M4 693 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 NUDT5Q9UKK9 219 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 SH3BP1Q9Y3L3 701 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 RAD54BQ9Y620 910 aa20.7■□□□□ 0.9
PTBP1-208ENST00000585956 ITPR1Q14643 2758 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 HHLA1C9JL84 531 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 CYP26A1O43174 497 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 MAP3K13O43283 966 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 CUTAO60888 179 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 ATICP31939 592 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 MAP3K7CLP57077 242 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 STK4Q13043 487 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 BIRC3Q13489 604 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 KNOP1Q1ED39 458 aaKnown RBP20.69■□□□□ 0.9
PTBP1-208ENST00000585956 HSF5Q4G112 596 aaPredicted RBP20.69■□□□□ 0.9
PTBP1-208ENST00000585956 SLC23A3Q6PIS1 610 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 PDZD8Q8NEN9 1154 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 SLC2A14Q8TDB8 520 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 SPACA7Q96KW9 195 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 KLF16Q9BXK1 252 aaPredicted RBP20.69■□□□□ 0.9
PTBP1-208ENST00000585956 NMUR1Q9HB89 426 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 DMAC2Q9NW81 257 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 KLK13Q9UKR3 277 aa20.69■□□□□ 0.9
PTBP1-208ENST00000585956 IGHV1OR15-9A0A0B4J2B8 117 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.68■□□□□ 0.9
PTBP1-208ENST00000585956 EXOC3O60645 756 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 PHACTR2O75167 634 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 HOXB2P14652 356 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 NDUFV2P19404 249 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 ASPAP45381 313 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 TUBP50607 506 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 NDST1P52848 882 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 SEMA3BQ13214 749 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 JAKMIP2Q96AA8 810 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 SMARCD1Q96GM5 515 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 LRRC27Q9C0I9 530 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 CAPN10Q9HC96 672 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 CSNK1G1Q9HCP0 422 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 DEC1Q9P2X7 70 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 PCDHA7Q9UN72 937 aa20.68■□□□□ 0.9
PTBP1-208ENST00000585956 WASH3PC4AMC7 463 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 NEDD8-MDP1E9PL57 170 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 TLR5O60602 858 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 YEATS4O95619 227 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 CFIP05156 583 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 RPL6Q02878 288 aaKnown RBP20.67■□□□□ 0.9
PTBP1-208ENST00000585956 PKP1Q13835 747 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 ZNF667Q5HYK9 610 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 TPGS1Q6ZTW0 290 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 BHMTQ93088 406 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 OTUB2Q96DC9 234 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 GTPBP2Q9BX10 602 aaKnown RBP20.67■□□□□ 0.9
PTBP1-208ENST00000585956 DNAJC17Q9NVM6 304 aaKnown RBP20.67■□□□□ 0.9
PTBP1-208ENST00000585956 BAHCC1Q9P281 2608 aa20.67■□□□□ 0.9
PTBP1-208ENST00000585956 SMG1Q96Q15 3661 aaKnown RBP20.66■□□□□ 0.9
PTBP1-208ENST00000585956 ADORA2BP29275 332 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 AMPD3Q01432 767 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 CAMK1GQ96NX5 476 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 DUSP9Q99956 384 aaKnown RBP20.66■□□□□ 0.9
PTBP1-208ENST00000585956 NUSAP1Q9BXS6 441 aaKnown RBP20.66■□□□□ 0.9
PTBP1-208ENST00000585956 KCTD10Q9H3F6 313 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 APOBEC3GQ9HC16 384 aaKnown RBP20.66■□□□□ 0.9
PTBP1-208ENST00000585956 SERTAD1Q9UHV2 236 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 CYP8B1Q9UNU6 501 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 ATRXP46100 2492 aa20.66■□□□□ 0.9
PTBP1-208ENST00000585956 K7ELQ4 463 aaPredicted RBP20.65■□□□□ 0.9
PTBP1-208ENST00000585956 CISD3P0C7P0 127 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 TYRP14679 529 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 NTSR1P30989 418 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 SNRPFP62306 86 aaKnown RBP20.65■□□□□ 0.9
PTBP1-208ENST00000585956 LMAN2Q12907 356 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 ZACNQ401N2 412 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 RESP18Q5W5W9 173 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 BTBD8Q5XKL5 378 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 GRAMD4Q6IC98 578 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 CLEC20AQ6ZU45 233 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 HTR3DQ70Z44 454 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 CRYBG2Q8N1P7 616 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 IPO4Q8TEX9 1081 aaKnown RBP20.65■□□□□ 0.9
PTBP1-208ENST00000585956 CACNA2D2Q9NY47 1150 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 PLK2Q9NYY3 685 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 STARD13Q9Y3M8 1113 aa20.65■□□□□ 0.9
PTBP1-208ENST00000585956 ATP8B3O60423 1300 aa20.64■□□□□ 0.89
PTBP1-208ENST00000585956 PVALEFA0A1B0GWK0 134 aa20.64■□□□□ 0.89
PTBP1-208ENST00000585956 A0A1W2PQH9 124 aa20.64■□□□□ 0.89
PTBP1-208ENST00000585956 SRRM3A6NNA2 597 aaPredicted RBP20.64■□□□□ 0.89
PTBP1-208ENST00000585956 ACTN4O43707 911 aaKnown RBP20.64■□□□□ 0.89
PTBP1-208ENST00000585956 CACNG3O60359 315 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms