RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 XPO6Q96QU8 1125 aaKnown RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 HNRNPABQ99729 332 aaKnown RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 KLF16Q9BXK1 252 aaPredicted RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 NUSAP1Q9BXS6 441 aaKnown RBP15.86■□□□□ 0.13
VAPA-209ENST00000585042 CYP3A43Q9HB55 503 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.86■□□□□ 0.132e-7■■■■□ 24.1
VAPA-209ENST00000585042 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 PLXND1Q9Y4D7 1925 aa15.86■□□□□ 0.13
VAPA-209ENST00000585042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 SCAMP3O14828 347 aaKnown RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 ZBTB24O43167 697 aaPredicted RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 AP5Z1O43299 807 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 GREM1O60565 184 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 BEST1O76090 585 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 CLSTN1O94985 981 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 FAM200BP0CF97 657 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 NTSR1P30989 418 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 PSEN1P49768 467 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 NOVA1P51513 510 aaKnown RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 MAP3K7CLP57077 242 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 KDSRQ06136 332 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 INCA1Q0VD86 236 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 ANO4Q32M45 955 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 PEAR1Q5VY43 1037 aaPredicted RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 SDE2Q6IQ49 451 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 SLC23A3Q6PIS1 610 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 SCARA5Q6ZMJ2 495 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 RABEPKQ7Z6M1 372 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 GRAMD1CQ8IYS0 662 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 NAT16Q8N8M0 369 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 CEP76Q8TAP6 659 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 HMGB4Q8WW32 186 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 CCDC47Q96A33 483 aaKnown RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 IMPG2Q9BZV3 1241 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 MARK1Q9P0L2 795 aa15.85■□□□□ 0.13
VAPA-209ENST00000585042 MBD1Q9UIS9 605 aaPredicted RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 LSM7Q9UK45 103 aaKnown RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 MYO18AQ92614 2054 aaKnown RBP15.85■□□□□ 0.13
VAPA-209ENST00000585042 TCRBV21S2A2A0A5A6 115 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 UPK3BL1B0FP48 263 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 UPK3BL2E5RIL1 263 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 CACNG3O60359 315 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 ZNF217O75362 1048 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 CCDC130P13994 396 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 ASPAP45381 313 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 VAMP7P51809 220 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 DNM1Q05193 864 aaKnown RBP15.84■□□□□ 0.13
VAPA-209ENST00000585042 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
VAPA-209ENST00000585042 TRIM61Q5EBN2 209 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 C10orf76Q5T2E6 689 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 SH3PXD2AQ5TCZ1 1133 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
VAPA-209ENST00000585042 INTS8Q75QN2 995 aaKnown RBP15.84■□□□□ 0.13
VAPA-209ENST00000585042 TADA2BQ86TJ2 420 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 C12orf29Q8N999 325 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 CYFIP2Q96F07 1278 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 NT5C1AQ9BXI3 368 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 PILRBQ9UKJ0 227 aa15.84■□□□□ 0.13
VAPA-209ENST00000585042 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 PATE3B3GLJ2 98 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 HHLA1C9JL84 531 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 GFRA2O00451 464 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 RHOBTB3O94955 611 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 HLA-DRAP01903 254 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 RPL13P26373 211 aaKnown RBP15.83■□□□□ 0.12
VAPA-209ENST00000585042 PIK3CAP42336 1068 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 C1orf220Q5T0J3 134 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 LYSMD4Q5XG99 296 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 CEP135Q66GS9 1140 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 GRAMD4Q6IC98 578 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 CLEC20AQ6ZU45 233 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 TTC39CQ8N584 583 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 CDK5RAP1Q96SZ6 601 aaKnown RBP15.83■□□□□ 0.12
VAPA-209ENST00000585042 BBS2Q9BXC9 721 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 FAM124BQ9H5Z6 455 aaPredicted RBP15.83■□□□□ 0.12
VAPA-209ENST00000585042 DNMT3LQ9UJW3 386 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 HPSEQ9Y251 543 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 ZNF510Q9Y2H8 683 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 SSUH2Q9Y2M2 353 aa15.83■□□□□ 0.12
VAPA-209ENST00000585042 MYH10P35580 1976 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 TBX18O95935 607 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 PROS1P07225 676 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 HOXB2P14652 356 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 TYRP14679 529 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 PFKFB1P16118 471 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 GABRG2P18507 467 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 PTGER3P43115 390 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 PGFP49763 221 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 ZNF132P52740 706 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 E2F5Q15329 346 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 DUOXA1Q1HG43 343 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 CCDC150Q8NCX0 1101 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 WBP2Q969T9 261 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 GABRG3Q99928 467 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 UBXN6Q9BZV1 441 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms