RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MFAP3LO75121 409 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 LTFP02788 710 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 CALB1P05937 261 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 RARGP13631 454 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 FMO1Q01740 532 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 FAM78AQ5JUQ0 283 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 EFHC1Q5JVL4 640 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 IRF2BP2Q7Z5L9 587 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 ARID3BQ8IVW6 561 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-215ENST00000584944 CELF5Q8N6W0 485 aaKnown RBP14.53□□□□□ -0.08
TRAF4-215ENST00000584944 ARL14EPQ8N8R7 260 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-215ENST00000584944 SPC24Q8NBT2 197 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 DDX1Q92499 740 aaKnown RBP14.53□□□□□ -0.08
TRAF4-215ENST00000584944 CPXM1Q96SM3 734 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 KXD1Q9BQD3 176 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 SLC4A5Q9BY07 1137 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 SLC46A2Q9BY10 475 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 KIF9Q9HAQ2 790 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 GRPEL1Q9HAV7 217 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 ABHD10Q9NUJ1 306 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 TDP1Q9NUW8 608 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 FAM86C1Q9NVL1 165 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 CLIC5Q9NZA1 410 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 IL37Q9NZH6 218 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 DNMT3LQ9UJW3 386 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 C2orf16Q68DN1 1984 aa14.53□□□□□ -0.08
TRAF4-215ENST00000584944 PTPRZ1P23471 2315 aaPredicted RBP14.52□□□□□ -0.08
TRAF4-215ENST00000584944 FAM92AA1XBS5 289 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 GOLGA8SH3BPF8 625 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 AP5Z1O43299 807 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 AKR1B10O60218 316 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 NCAM1P13591 858 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 CDC25BP30305 580 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 PRKCIP41743 596 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 DAOAP59103 153 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.09
TRAF4-215ENST00000584944 NOMO3P69849 1222 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 EFEMP1Q12805 493 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 CLEC16AQ2KHT3 1053 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 FAM102AQ5T9C2 384 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-215ENST00000584944 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 PM20D1Q6GTS8 502 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 MMS22LQ6ZRQ5 1243 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-215ENST00000584944 TMEM150AQ86TG1 271 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 TMEM110Q86TL2 294 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 MIB1Q86YT6 1006 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 SCML4Q8N228 414 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 TMEM105Q8N8V8 129 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 SLC30A5Q8TAD4 765 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 EDEM1Q92611 657 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 ATOH1Q92858 354 aaPredicted RBP14.52□□□□□ -0.09
TRAF4-215ENST00000584944 TRIM11Q96F44 468 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 CCDC42Q96M95 316 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 ZSWIM3Q96MP5 696 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 ASB16Q96NS5 453 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 CYP2S1Q96SQ9 504 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 DNAJC7Q99615 494 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 CCSER2Q9H7U1 834 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 SMPD4Q9NXE4 827 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 ADAM22Q9P0K1 906 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 RASAL2Q9UJF2 1139 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 SH3BP1Q9Y3L3 701 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 NUMBLQ9Y6R0 609 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 PTPRDP23468 1912 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 DMDP11532 3685 aa14.52□□□□□ -0.09
TRAF4-215ENST00000584944 YJEFN3A6XGL0 299 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 E7ENQ6 273 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 H0Y858 1186 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 COCHO43405 550 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 NRDCO43847 1150 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 HSF2BPO75031 334 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 MOSPD3O75425 235 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 TADA3O75528 432 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 IPO7O95373 1038 aaKnown RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 CHRNB2P17787 502 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 CDH5P33151 784 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 RNASE9P60153 205 aaKnown RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 SNX30Q5VWJ9 437 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 WDTC1Q8N5D0 677 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 NDRG1Q92597 394 aaKnown RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 C11orf70Q9BRQ4 267 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 SMG9Q9H0W8 520 aaKnown RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 KCNK12Q9HB15 430 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 POPDC2Q9HBU9 364 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 MARCH2Q9P0N8 246 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 WDR35Q9P2L0 1181 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 IMPACTQ9P2X3 320 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 CYTH4Q9UIA0 394 aa14.51□□□□□ -0.09
TRAF4-215ENST00000584944 LSM7Q9UK45 103 aaKnown RBP14.51□□□□□ -0.09
TRAF4-215ENST00000584944 CFAP54Q96N23 3096 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 RIF1Q5UIP0 2472 aaKnown RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 PAPSS1O43252 624 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 GFRA3O60609 400 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ECI2O75521 394 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 OAS1P00973 400 aaKnown RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ERBB2P04626 1255 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 CYP1A1P04798 512 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms