RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RASSF3Q86WH2 238 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 TMEM25Q86YD3 366 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 SPHK2Q9NRA0 654 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 DEC1Q9P2X7 70 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 LSM7Q9UK45 103 aaKnown RBP21.56■■□□□ 1.04
TOP3A-219ENST00000584887 NUDT5Q9UKK9 219 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 SCML2Q9UQR0 700 aa21.56■■□□□ 1.04
TOP3A-219ENST00000584887 A0A1W2PQH9 124 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 MDM4O15151 490 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 HOXC11O43248 304 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 CILPO75339 1184 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 TULP3O75386 442 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 CAVIN2O95810 425 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 EPB41P11171 864 aaKnown RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 ATP5C1P36542 298 aaKnown RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 TNFRSF4P43489 277 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 MXI1P50539 228 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 PNOCQ13519 176 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 ZCWPW2Q504Y3 356 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 C10orf120Q5SQS8 335 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 C10orf76Q5T2E6 689 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 KRT39Q6A163 491 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 C11orf74Q86VG3 221 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 PGBD3Q8N328 593 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 WHAMMQ8TF30 809 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 HMGB4Q8WW32 186 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 RLN3Q8WXF3 142 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 HEXIM2Q96MH2 286 aaKnown RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 KLF16Q9BXK1 252 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 POLMQ9NP87 494 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-219ENST00000584887 OSER1Q9NX31 292 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 PCDHA5Q9Y5H7 936 aa21.55■■□□□ 1.04
TOP3A-219ENST00000584887 ACACBO00763 2458 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 THADAQ6YHU6 1953 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 BCLAF3A2AJT9 711 aaKnown RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 HHLA1C9JL84 531 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 NEDD8-MDP1E9PL57 170 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 RARGP13631 454 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 KIR2DL1P43626 348 aaPredicted RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 DHPSP49366 369 aaPredicted RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 LIMK1P53667 647 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 EDRF1Q3B7T1 1238 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 HSF5Q4G112 596 aaPredicted RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 PMS2CLQ68D20 193 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 RNF43Q68DV7 783 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 CYP2U1Q7Z449 544 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 ETFBKMTQ8IXQ9 262 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 PHTF2Q8N3S3 785 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 DDX1Q92499 740 aaKnown RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 SEMA4DQ92854 862 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 NMUR1Q9HB89 426 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 DNAJC17Q9NVM6 304 aaKnown RBP21.54■■□□□ 1.04
TOP3A-219ENST00000584887 NAGPAQ9UK23 515 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
TOP3A-219ENST00000584887 TCRBV21S2A2A0A5A6 115 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 TRIM24O15164 1050 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 CETN3O15182 167 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 MAP3K13O43283 966 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 ADRB1P08588 477 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 GTF2H1P32780 548 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 ENPEPQ07075 957 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 PREPLQ4J6C6 727 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-219ENST00000584887 PPP1R26Q5T8A7 1209 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-219ENST00000584887 TCERG1LQ5VWI1 586 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 GRAMD4Q6IC98 578 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 TPGS1Q6ZTW0 290 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 NUDT18Q6ZVK8 323 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 ZNF513Q8N8E2 541 aaPredicted RBP21.53■■□□□ 1.04
TOP3A-219ENST00000584887 BHMTQ93088 406 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 SPACA7Q96KW9 195 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 CNTNAP3BQ96NU0 1288 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 EDEM2Q9BV94 578 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 BBS2Q9BXC9 721 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 CNTNAP3Q9BZ76 1288 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 CYLDQ9NQC7 956 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 DNMT3LQ9UJW3 386 aa21.53■■□□□ 1.04
TOP3A-219ENST00000584887 GON4LQ3T8J9 2241 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 GOLGA6L4A6NEF3 574 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 STX10O60499 249 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 ADAM23O75077 832 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 CHRM1P11229 460 aaPredicted RBP21.52■■□□□ 1.04
TOP3A-219ENST00000584887 WASP42768 502 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 DCAF17Q5H9S7 520 aaPredicted RBP21.52■■□□□ 1.04
TOP3A-219ENST00000584887 HTR3DQ70Z44 454 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 MIB1Q86YT6 1006 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 TERB1Q8NA31 727 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 FBXL13Q8NEE6 735 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 TSG101Q99816 390 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 DUSP16Q9BY84 665 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 PNPLA8Q9NP80 782 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 RMND1Q9NWS8 449 aa21.52■■□□□ 1.04
TOP3A-219ENST00000584887 DNAH14Q0VDD8 3507 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 A0A0A0MRY4 1105 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 RALAP11233 206 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 KIF11P52732 1056 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 ARMCX6Q7L4S7 300 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 TRMT11Q7Z4G4 463 aaKnown RBP21.51■■□□□ 1.03
TOP3A-219ENST00000584887 PIGKQ92643 395 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 ERLEC1Q96DZ1 483 aa21.51■■□□□ 1.03
TOP3A-219ENST00000584887 XPO6Q96QU8 1125 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms