RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SCUBE3Q8IX30 993 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 CSGALNACT2Q8N6G5 542 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 IPO4Q8TEX9 1081 aaKnown RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 NOC3LQ8WTT2 800 aaKnown RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 ACCSQ96QU6 501 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 OLFML3Q9NRN5 406 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 TM7SF3Q9NS93 570 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 DEC1Q9P2X7 70 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 USP25Q9UHP3 1055 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 EXOC7Q9UPT5 735 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 FNDC3AQ9Y2H6 1198 aaKnown RBP10.85□□□□□ -0.67
GGA3-219ENST00000584550 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 RAI2Q9Y5P3 530 aa10.85□□□□□ -0.67
GGA3-219ENST00000584550 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
GGA3-219ENST00000584550 A0A1B0GTW7 788 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 WASH3PC4AMC7 463 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ATXN7O15265 892 aaPredicted RBP10.84□□□□□ -0.67
GGA3-219ENST00000584550 CILPO75339 1184 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ZNF202O95125 648 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 PDGFRBP09619 1106 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ANXA13P27216 316 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 PNPLA4P41247 253 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 TAF10Q12962 218 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 CAMK2BQ13554 666 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 HLA-BQ31612 363 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 FAM26FQ5R3K3 315 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 L1TD1Q5T7N2 865 aaKnown RBP10.84□□□□□ -0.67
GGA3-219ENST00000584550 FAM171BQ6P995 826 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 KRBA2Q6ZNG9 492 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 STXBP4Q6ZWJ1 553 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 UNC13DQ70J99 1090 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 TMEM25Q86YD3 366 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 TMEM86AQ8N2M4 240 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 GALNT15Q8N3T1 639 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ZNF843Q8N446 348 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ZSWIM2Q8NEG5 633 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 MYLPFQ96A32 169 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 FUBP3Q96I24 572 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGA3-219ENST00000584550 ZDHHC5Q9C0B5 715 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 ST6GALNAC4Q9H4F1 302 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 SLC39A2Q9NP94 309 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 EXOC1Q9NV70 894 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGA3-219ENST00000584550 BTBD3Q9Y2F9 522 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 CFAP46Q8IYW2 2715 aa10.84□□□□□ -0.67
GGA3-219ENST00000584550 FAM237AA0A1B0GTK4 181 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PVALEFA0A1B0GWK0 134 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 TK2O00142 265 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PLK4O00444 970 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PPP1R37O75864 691 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PCSK1P29120 753 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 MATKP42679 507 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 MAGEA11P43364 429 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 LHX1P48742 406 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 BNC1Q01954 994 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 ALCAMQ13740 583 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 SOWAHAQ2M3V2 549 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 SLFN12LQ6IEE8 588 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 C4orf50Q6ZRC1 276 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 NUDT18Q6ZVK8 323 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 NELFCDQ8IXH7 590 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 ETFBKMTQ8IXQ9 262 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
GGA3-219ENST00000584550 C1orf127Q8N9H9 656 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 TERB1Q8NA31 727 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 TOE1Q96GM8 510 aaKnown RBP10.83□□□□□ -0.68
GGA3-219ENST00000584550 SPATA17Q96L03 361 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 MRGPRX1Q96LB2 322 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 CDC6Q99741 560 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 SYT15Q9BQS2 421 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 FAM213AQ9BRX8 229 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 STRA6Q9BX79 667 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 GPR174Q9BXC1 333 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 PCIF1Q9H4Z3 704 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 CRTAC1Q9NQ79 661 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 TBC1D14Q9P2M4 693 aa10.83□□□□□ -0.68
GGA3-219ENST00000584550 GOLGA8IPA6NC78 632 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 GOLGA8JA6NMD2 632 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 F8VP50 259 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 PYCARD-AS1I3L0S3 204 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 KCNK3O14649 394 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 GABRDO14764 452 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 BCAT2O15382 392 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 GADD45BO75293 160 aaPredicted RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 IL18RAPO95256 599 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 CER1O95813 267 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 OLFM2O95897 454 aa10.82□□□□□ -0.68
GGA3-219ENST00000584550 OAS1P00973 400 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
GGA3-219ENST00000584550 IRF1P10914 325 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms