RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 P2RY2P41231 377 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PTGER3P43115 390 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PPP3CCP48454 512 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ZACNQ401N2 412 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MDH1BQ5I0G3 518 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 EOGTQ5NDL2 527 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SV2AQ7L0J3 742 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 FRMD1Q8N878 549 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 IL17RCQ8NAC3 791 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MYCBPAPQ8TBZ2 947 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ZNF516Q92618 1163 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PCED1BQ96HM7 432 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■■□□ 19.2
CDK5RAP3-234ENST00000584525 CFAP97Q9P2B7 532 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 EVLQ9UI08 416 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 RWDD2AQ9UIY3 292 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TMEM8BA6NDV4 472 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 F8VP50 259 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ADH1CP00326 375 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ADH5P11766 374 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 GRIA2P42262 883 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 CLDN10P78369 228 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 KDSRQ06136 332 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MESP2Q0VG99 397 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TAF10Q12962 218 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 BYSLQ13895 437 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 HSF5Q4G112 596 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 CCDC183Q5T5S1 534 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 LIMS2Q7Z4I7 341 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SYT12Q8IV01 421 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 KIAA1958Q8N8K9 716 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ARHGEF4Q9NR80 690 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TMEM74BQ9NUR3 256 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ASPMQ8IZT6 3477 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
CDK5RAP3-234ENST00000584525 RALGAPA1Q6GYQ0 2036 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TBC1D3BA6NDS4 549 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TACC1O75410 805 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 CFIP05156 583 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MBL2P11226 248 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ENGP17813 658 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 EIF2DP41214 584 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ATXN3P54252 364 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 COL9A2Q14055 689 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 FOXR2Q6PJQ5 311 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 C12orf40Q86WS4 652 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 DDX42Q86XP3 938 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 GATA6Q92908 595 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SLITRK1Q96PX8 696 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MED10Q9BTT4 135 aa13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TMEM121BQ9BXQ6 578 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-234ENST00000584525 A0A0A0MRY4 1105 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SPAARA0A1B0GVQ0 90 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 HYAL3O43820 417 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 ADAM23O75077 832 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 OLFM2O95897 454 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 OAS1P00973 400 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 FAM163BP0C2L3 166 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 BMP6P22004 513 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 DPP6P42658 865 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 KIR2DL1P43626 348 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SIM1P81133 766 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 PPP3CAQ08209 521 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 MAP7D1Q3KQU3 841 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 SPDYCQ5MJ68 293 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 LY6G5CQ5SRR4 150 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 BTBD8Q5XKL5 378 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TTI2Q6NXR4 508 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 HDDC3Q8N4P3 179 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 TTC39CQ8N584 583 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 DEFB119Q8N690 84 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 NAT16Q8N8M0 369 aa13.86□□□□□ -0.19
CDK5RAP3-234ENST00000584525 GPT2Q8TD30 523 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms