RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 PTPRDP23468 1912 aa14.15□□□□□ -0.14
COPS3-218ENST00000584216 CLDN5O00501 218 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 NPC1O15118 1278 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 ZNF883P0CG24 379 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 IRF1P10914 325 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 TYRP14679 529 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
COPS3-218ENST00000584216 USP49Q70CQ1 688 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 METTL3Q86U44 580 aaKnown RBP14.14□□□□□ -0.15
COPS3-218ENST00000584216 MIB1Q86YT6 1006 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 PNPLA1Q8N8W4 532 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 CADM4Q8NFZ8 388 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 SETD7Q8WTS6 366 aaKnown RBP14.14□□□□□ -0.15
COPS3-218ENST00000584216 SYAP1Q96A49 352 aaPredicted RBP14.14□□□□□ -0.15
COPS3-218ENST00000584216 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 CDC6Q99741 560 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 MED10Q9BTT4 135 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 DPEP3Q9H4B8 488 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 FBXO44Q9H4M3 255 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 CD248Q9HCU0 757 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 TLR8Q9NR97 1041 aaKnown RBP14.14□□□□□ -0.15
COPS3-218ENST00000584216 TMEM30AQ9NV96 361 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 IL37Q9NZH6 218 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 MARK1Q9P0L2 795 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 DKK4Q9UBT3 224 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 PCOLCE2Q9UKZ9 415 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 FREM2Q5SZK8 3169 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 PCDH15Q96QU1 1955 aa14.14□□□□□ -0.15
COPS3-218ENST00000584216 FAM92AA1XBS5 289 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 EIF3DO15371 548 aaKnown RBP eCLIP14.13□□□□□ -0.15
COPS3-218ENST00000584216 TLR5O60602 858 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 CLSTN1O94985 981 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 ZDHHC11BP0C7U3 371 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
COPS3-218ENST00000584216 OXTRP30559 389 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 DGKGP49619 791 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 PSMD6Q15008 389 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 FAM35AQ86V20 835 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 GALNT15Q8N3T1 639 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 SCAMP5Q8TAC9 235 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 DNASE2BQ8WZ79 361 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 ACOX2Q99424 681 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 FGFBP2Q9BYJ0 223 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 GMIPQ9P107 970 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 NXF1Q9UBU9 619 aaKnown RBP14.13□□□□□ -0.15
COPS3-218ENST00000584216 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
COPS3-218ENST00000584216 HCN2Q9UL51 889 aa14.13□□□□□ -0.15
COPS3-218ENST00000584216 DSPP15924 2871 aaKnown RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 PCNX2A6NKB5 2137 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 CACNA1EQ15878 2313 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 FLRT2O43155 660 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 CBFA2T3O75081 653 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 PHACTR2O75167 634 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 CST3P01034 146 aaPredicted RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 NCAM1P13591 858 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 ATP5C1P36542 298 aaKnown RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 MATKP42679 507 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 SNRPFP62306 86 aaKnown RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 TPGS1Q6ZTW0 290 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 ENGASEQ8NFI3 743 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 MDM1Q8TC05 714 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 HNRNPLLQ8WVV9 542 aaKnown RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 CCDC127Q96BQ5 260 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 TOE1Q96GM8 510 aaKnown RBP14.12□□□□□ -0.15
COPS3-218ENST00000584216 KCNK16Q96T55 309 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 PRDM16Q9HAZ2 1276 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 CACNA2D2Q9NY47 1150 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 RAXQ9Y2V3 346 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 NME7Q9Y5B8 376 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 PCDHGB2Q9Y5G2 931 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 RAD54BQ9Y620 910 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
COPS3-218ENST00000584216 PRRT4C9JH25 899 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 TRIM24O15164 1050 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 BCAT2O15382 392 aaPredicted RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 SYNCRIPO60506 623 aaKnown RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 AP1G2O75843 785 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 P4HA1P13674 534 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 PDCP20941 246 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 MAOBP27338 520 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 CYP24A1Q07973 514 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 SUZ12Q15022 739 aaKnown RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 TMPRSS7Q7RTY8 843 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 TADA2BQ86TJ2 420 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 ZCCHC9Q8N567 271 aaKnown RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 RDH13Q8NBN7 331 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 UCMAQ8WVF2 138 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 LRIG1Q96JA1 1093 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 MIR1-1HGQ9H1L0 117 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 TNMDQ9H2S6 317 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 GAREM1Q9H706 876 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 VRTNQ9H8Y1 702 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 TM7SF3Q9NS93 570 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 KRT82Q9NSB4 513 aa14.11□□□□□ -0.15
COPS3-218ENST00000584216 WSB2Q9NYS7 404 aaPredicted RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 USP36Q9P275 1121 aaKnown RBP14.11□□□□□ -0.15
COPS3-218ENST00000584216 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
COPS3-218ENST00000584216 CILPO75339 1184 aa14.1□□□□□ -0.15
COPS3-218ENST00000584216 ACADMP11310 421 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms