RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 KRT3P12035 628 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 MYL4P12829 197 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 DDX6P26196 483 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 MTHFRP42898 656 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 DLX2Q07687 328 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 MAMLD1Q13495 774 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 TCEAL1Q15170 157 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 PRSS36Q5K4E3 855 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 ATAT1Q5SQI0 421 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 EP400NLQ6ZTU2 488 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 GAREM2Q75VX8 874 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 GRASPQ7Z6J2 395 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 SCD5Q86SK9 330 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 SMRP1Q8NCR6 262 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 RFFLQ8WZ73 363 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 MRPS31Q92665 395 aaKnown RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 PIWIL1Q96J94 861 aaKnown RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 CALR3Q96L12 384 aaKnown RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 SLC2A13Q96QE2 648 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 DESI2Q9BSY9 194 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 TSGA10Q9BZW7 698 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 S1PR5Q9H228 398 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 METTL5Q9NRN9 209 aaKnown RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 OLA1Q9NTK5 396 aaKnown RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 TMEM51Q9NW97 253 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 RRN3Q9NYV6 651 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 MYO1AQ9UBC5 1043 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 CD207Q9UJ71 328 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 TMEM59LQ9UK28 342 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 CAPN9O14815 690 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 ATMINO43313 823 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 MTA2O94776 668 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 DESP17661 470 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 NOS2P35228 1153 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 CCDC85BQ15834 202 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 HECTD3Q5T447 861 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 MSANTD2Q6P1R3 559 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 DCUN1D2Q6PH85 259 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 KLHDC10Q6PID8 442 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 TMEM150AQ86TG1 271 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 FEZF2Q8TBJ5 459 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 RNF139Q8WU17 664 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 NDRG1Q92597 394 aaKnown RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 ARHGEF26Q96DR7 871 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 NECTIN4Q96NY8 510 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 NUP85Q9BW27 656 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 NMUR1Q9HB89 426 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 WDR6Q9NNW5 1121 aaKnown RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDRT1-207ENST00000583965 CTTNBP2NLQ9P2B4 639 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 COG5Q9UP83 839 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 PPP2R2CQ9Y2T4 447 aa12.2□□□□□ -0.46
CDRT1-207ENST00000583965 A0A1W2PRU2 124 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 TMEM191CA6NGB0 347 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 ZSCAN12O43309 604 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 KRT86O43790 486 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 TLR5O60602 858 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 ABL1P00519 1130 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 OAS1P00973 400 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 FYNP06241 537 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 NCAM1P13591 858 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 RARGP13631 454 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 FSHRP23945 695 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 CCR2P41597 374 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 MATKP42679 507 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 HADHBP55084 474 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 RNASE9P60153 205 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 NTHL1P78549 312 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 TAF5Q15542 800 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 SHKBP1Q8TBC3 707 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 SLC35G2Q8TBE7 412 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 ZNF564Q8TBZ8 553 aaPredicted RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 HLA-CQ95604 372 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 MCEEQ96PE7 176 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 APOL5Q9BWW9 433 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 OSER1Q9NX31 292 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 STAP1Q9ULZ2 295 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 MRPS23Q9Y3D9 190 aaKnown RBP12.19□□□□□ -0.46
CDRT1-207ENST00000583965 DOCK4Q8N1I0 1966 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 XIRP2A4UGR9 3374 aa12.19□□□□□ -0.46
CDRT1-207ENST00000583965 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms