RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 PRO3102Q9H379 93 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 CYP4F11Q9HBI6 524 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 METTL5Q9NRN9 209 aaKnown RBP9.64□□□□□ -0.87
CASC3-209ENST00000583902 DZANK1Q9NVP4 752 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 DNAI1Q9UI46 699 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 TTC7AQ9ULT0 858 aaPredicted RBP9.64□□□□□ -0.87
CASC3-209ENST00000583902 COG5Q9UP83 839 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 EFR3BQ9Y2G0 817 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 HYOU1Q9Y4L1 999 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 SAR1BQ9Y6B6 198 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 CAPN6Q9Y6Q1 641 aa9.64□□□□□ -0.87
CASC3-209ENST00000583902 COL4A4P53420 1690 aaPredicted RBP9.64□□□□□ -0.87
CASC3-209ENST00000583902 GOLGA8SH3BPF8 625 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 TULP2O00295 520 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 XYLBO75191 536 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ZNF189O75820 626 aaPredicted RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 OR4Q2P0C623 313 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 COMTP21964 271 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 DNAJB2P25686 324 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
CASC3-209ENST00000583902 HTR7P34969 479 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 CTNNA1P35221 906 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 CLCN4P51793 760 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 RWDD2BP57060 319 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 RPL7AP62424 266 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 CKAP4Q07065 602 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 MESDQ14696 234 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 WHAMMP3Q1A5X7 153 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ARL13BQ3SXY8 428 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ODF2Q5BJF6 829 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 BSPRYQ5W0U4 402 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 BTBD8Q5XKL5 378 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 MSANTD2Q6P1R3 559 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 SYT10Q6XYQ8 523 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 MAP7D3Q8IWC1 876 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 KIAA1958Q8N8K9 716 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 KREMEN2Q8NCW0 462 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 MNS1Q8NEH6 495 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 CMASQ8NFW8 434 aaPredicted RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 RXFP2Q8WXD0 754 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 CD101Q93033 1021 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 FBXO32Q969P5 355 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 FAM149B1Q96BN6 582 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 MRPL38Q96DV4 380 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 RBM41Q96IZ5 413 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 ZNF512Q96ME7 567 aaPredicted RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 SERPINB11Q96P15 392 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 PGLYRP2Q96PD5 576 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ULBP1Q9BZM6 244 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 RETREG1Q9H6L5 497 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 ALG13Q9NP73 1137 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 DONSONQ9NYP3 566 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 TRIM10Q9UDY6 481 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 SNX12Q9UMY4 172 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 YBX2Q9Y2T7 364 aaKnown RBP9.63□□□□□ -0.87
CASC3-209ENST00000583902 YIPF1Q9Y548 306 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 INSL5Q9Y5Q6 135 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 MYO16Q9Y6X6 1858 aa9.63□□□□□ -0.87
CASC3-209ENST00000583902 C2orf72A6NCS6 295 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 SLC38A8A6NNN8 435 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 MDM4O15151 490 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 TGM5O43548 720 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 PRPSAP2O60256 369 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 VNN2O95498 520 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 USP17L7P0C7H9 530 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 NCAM1P13591 858 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 RPL17P18621 184 aaKnown RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 POU3F3P20264 500 aaPredicted RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 CDC25CP30307 473 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 PTPN7P35236 360 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 RDXP35241 583 aaKnown RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 PAFAH1B1P43034 410 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 ERVFC1P60507 584 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 YWHAGP61981 247 aaKnown RBP eCLIP9.62□□□□□ -0.87
CASC3-209ENST00000583902 ITIH3Q06033 890 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 RING1Q06587 406 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 PDK2Q15119 407 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 BRMS1LQ5PSV4 323 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 BNIPLQ7Z465 357 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 KATNAL2Q8IYT4 538 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 RCOR2Q8IZ40 523 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 C17orf53Q8N3J3 647 aaPredicted RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 EXD1Q8NHP7 514 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 RNF139Q8WU17 664 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 CASP10Q92851 521 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.87
CASC3-209ENST00000583902 NTAN1Q96AB6 310 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 WDR24Q96S15 920 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 NPY6RQ99463 290 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 IRX2Q9BZI1 471 aaPredicted RBP9.62□□□□□ -0.87
CASC3-209ENST00000583902 NKX2-4Q9H2Z4 354 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 SMOC2Q9H3U7 446 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 HOMER3Q9NSC5 361 aa9.62□□□□□ -0.87
CASC3-209ENST00000583902 TRPM5Q9NZQ8 1165 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms