RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CLDN5O00501 218 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 ADH1CP00326 375 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 DLATP10515 647 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 PTPN1P18031 435 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 MAPK8P45983 427 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 PAK1Q13153 545 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 MAP7D1Q3KQU3 841 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 HSF5Q4G112 596 aaPredicted RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 TDRD10Q5VZ19 366 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 DHX40Q8IX18 779 aaKnown RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 OR6B3Q8NGW1 331 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 GATA6Q92908 595 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 DHTKD1Q96HY7 919 aaPredicted RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 SPACA7Q96KW9 195 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 SLITRK1Q96PX8 696 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 ELOVL4Q9GZR5 314 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 GRPEL1Q9HAV7 217 aa21.71■■□□□ 1.07
SRSF1-206ENST00000583741 POLMQ9NP87 494 aaPredicted RBP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 BCCIPQ9P287 314 aaKnown RBP eCLIP21.71■■□□□ 1.07
SRSF1-206ENST00000583741 TCRBV21S2A2A0A5A6 115 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 IKBKBO14920 756 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 MAP3K13O43283 966 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 KIF20AO95235 890 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 GRIA2P42262 883 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 MYL5Q02045 173 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 LMAN2Q12907 356 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 SNRNP35Q16560 246 aaKnown RBP21.7■■□□□ 1.06
SRSF1-206ENST00000583741 EOGTQ5NDL2 527 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 LY6G5CQ5SRR4 150 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 SYT12Q8IV01 421 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 RDH13Q8NBN7 331 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 NELFBQ8WX92 580 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 B3GNT5Q9BYG0 378 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 RWDD2AQ9UIY3 292 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 NBEAQ8NFP9 2946 aa21.7■■□□□ 1.06
SRSF1-206ENST00000583741 LAMA5O15230 3695 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 SMTNL1A8MU46 457 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 GOLGA6L19H0YKK7 550 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 ENGP17813 658 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 TNNI1P19237 187 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 WDR72Q3MJ13 1102 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 KIAA1211LQ6NV74 962 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 STXBP4Q6ZWJ1 553 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 EPM2AIP1Q7L775 607 aaPredicted RBP21.69■■□□□ 1.06
SRSF1-206ENST00000583741 CGRRF1Q99675 332 aa21.69■■□□□ 1.06
SRSF1-206ENST00000583741 NUSAP1Q9BXS6 441 aaKnown RBP21.69■■□□□ 1.06
SRSF1-206ENST00000583741 PCDH15Q96QU1 1955 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 TGFB1I1O43294 461 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 COCHO43405 550 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 STX17P56962 302 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 DDX42Q86XP3 938 aaKnown RBP eCLIP21.68■■□□□ 1.066e-8■■□□□ 14.2
SRSF1-206ENST00000583741 ETFBKMTQ8IXQ9 262 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 B3GALNT2Q8NCR0 500 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 ENOX1Q8TC92 643 aaKnown RBP21.68■■□□□ 1.06
SRSF1-206ENST00000583741 SCFD1Q8WVM8 642 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 CCDC127Q96BQ5 260 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 KCNK16Q96T55 309 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 KIAA1586Q9HCI6 787 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 FSCN3Q9NQT6 498 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 AGPAT3Q9NRZ7 376 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 PILRBQ9UKJ0 227 aa21.68■■□□□ 1.06
SRSF1-206ENST00000583741 E2F8A0AVK6 867 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 BICDL2A1A5D9 508 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 A8MXQ7 604 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.67■■□□□ 1.06
SRSF1-206ENST00000583741 EIF3DO15371 548 aaKnown RBP eCLIP21.67■■□□□ 1.06
SRSF1-206ENST00000583741 ITPKAP23677 461 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 YWHAQP27348 245 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 TNFRSF4P43489 277 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 TNNC1P63316 161 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 CYP24A1Q07973 514 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 PSMD6Q15008 389 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 PEAR1Q5VY43 1037 aaPredicted RBP21.67■■□□□ 1.06
SRSF1-206ENST00000583741 LYSMD4Q5XG99 296 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 SLC23A3Q6PIS1 610 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 NUP93Q8N1F7 819 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 PGBD3Q8N328 593 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 NAT16Q8N8M0 369 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 MED15Q96RN5 788 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 TBC1D14Q9P2M4 693 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 HCN2Q9UL51 889 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 ITPR1Q14643 2758 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 UBE4BO95155 1302 aa21.67■■□□□ 1.06
SRSF1-206ENST00000583741 ANKRD11Q6UB99 2663 aaPredicted RBP21.66■■□□□ 1.06
SRSF1-206ENST00000583741 CYP2J2P51589 502 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 MYL6P60660 151 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 NCAPHQ15003 741 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 BMT2Q1RMZ1 405 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 BBS7Q8IWZ6 715 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 SCAMP5Q8TAC9 235 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 ZNF516Q92618 1163 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 FBXO32Q969P5 355 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 WBP2Q969T9 261 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 XYLT2Q9H1B5 865 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 CCSER2Q9H7U1 834 aa21.66■■□□□ 1.06
SRSF1-206ENST00000583741 NXF1Q9UBU9 619 aaKnown RBP21.66■■□□□ 1.06
SRSF1-206ENST00000583741 CHORDC1Q9UHD1 332 aaPredicted RBP21.66■■□□□ 1.06
SRSF1-206ENST00000583741 SPAARA0A1B0GVQ0 90 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 TRIM49BA6NDI0 452 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 TRIM24O15164 1050 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms