RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 RNASE9P60153 205 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 YWHAZP63104 245 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TMEM184AQ6ZMB5 413 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SCD5Q86SK9 330 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TPCN2Q8NHX9 752 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FBXO32Q969P5 355 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TRMT2BQ96GJ1 504 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF512Q96ME7 567 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TRIM7Q9C029 511 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IGFLR1Q9H665 355 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GREB1Q4ZG55 1949 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MYO1FO00160 1098 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 RFPL2O75678 378 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MOCS3O95396 460 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PAPLNO95428 1278 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LTFP02788 710 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HNRNPA1P09651 372 aaKnown RBP eCLIP17.12■□□□□ 0.338e-6■□□□□ 10.1
CDK5RAP3-228ENST00000583363 ZDHHC11BP0C7U3 371 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PGFP49763 221 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 OGDHQ02218 1023 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HYAL1Q12794 435 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TAF12Q16514 161 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BSPRYQ5W0U4 402 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TRNP1Q6NT89 227 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ELMSAN1Q6PJG2 1045 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BEND5Q7L4P6 421 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DEFB106AQ8N104 65 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 EMC1Q8N766 993 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FNIP1Q8TF40 1166 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 RXFP2Q8WXD0 754 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 OVCA2Q8WZ82 227 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FAM149B1Q96BN6 582 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BTBD6Q96KE9 485 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MCEEQ96PE7 176 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SLC2A13Q96QE2 648 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LRRC3Q9BY71 257 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 POPDC2Q9HBU9 364 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GMIPQ9P107 970 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 C5orf42Q9H799 3197 aa17.12■□□□□ 0.33
CDK5RAP3-228ENST00000583363 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CCL16O15467 120 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 POU2F2P09086 479 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ALADP13716 330 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FLT3P36888 993 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ELMOD1Q8N336 334 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 EFHBQ8N7U6 833 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CASP10Q92851 521 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SLITRK1Q96PX8 696 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PRKD2Q9BZL6 878 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 UXTQ9UBK9 157 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IP6K2Q9UHH9 426 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 NAALADL1Q9UQQ1 740 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PIEZO1Q92508 2521 aa17.11■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF638Q14966 1978 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CCDC195A0A1B0GUA6 201 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BUB1BO60566 1050 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DAB1O75553 588 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 F11P03951 625 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PTPN2P17706 415 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GPD1P21695 349 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 NOS2P35228 1153 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MATKP42679 507 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PPP3CCP48454 512 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PSEN1P49768 467 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ADAM15Q13444 863 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MESDQ14696 234 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CCDC14Q49A88 953 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BTBD8Q5XKL5 378 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 SLFN11Q7Z7L1 901 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PDZD8Q8NEN9 1154 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TRIM62Q9BVG3 475 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IL21Q9HBE4 155 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF334Q9HCZ1 680 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms