RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 S1PR5Q9H228 398 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 TLR8Q9NR97 1041 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 ASNSD1Q9NWL6 643 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 TRMT1Q9NXH9 659 aaKnown RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 CLDND1Q9NY35 253 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 EHD2Q9NZN4 543 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 UVRAGQ9P2Y5 699 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 UXTQ9UBK9 157 aaPredicted RBP9.99□□□□□ -0.81
RFFL-210ENST00000582308 CDH22Q9UJ99 828 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 SCINQ9Y6U3 715 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 DENND4AQ7Z401 1863 aa9.99□□□□□ -0.81
RFFL-210ENST00000582308 A0A0A6YYK5 440 aaPredicted RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 C2CD4BA6NLJ0 364 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 USP27XA6NNY8 438 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MOSPD3O75425 235 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MTA2O94776 668 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 RHOP08100 348 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 SRGAP2BP0DMP2 458 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MYL4P12829 197 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 GJA1P17302 382 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 GABRR2P28476 465 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 PSEN1P49768 467 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 HADHBP55084 474 aaKnown RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 OGDHQ02218 1023 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 ZNF252P-AS1Q0IIN9 211 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 KIF5AQ12840 1032 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 CCDC85BQ15834 202 aaPredicted RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 SLC5A9Q2M3M2 681 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 DCUN1D2Q6PH85 259 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 EP400NLQ6ZTU2 488 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 BEND5Q7L4P6 421 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 ARCQ7LC44 396 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 RHOT2Q8IXI1 618 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 DEFB106AQ8N104 65 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 CCAR2Q8N163 923 aaKnown RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 ARHGAP18Q8N392 663 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 C17orf53Q8N3J3 647 aaPredicted RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 PDZD8Q8NEN9 1154 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 SHKBP1Q8TBC3 707 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 ZNF564Q8TBZ8 553 aaPredicted RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 KIAA1524Q8TCG1 905 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 RXFP2Q8WXD0 754 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 EDEM1Q92611 657 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 BTBD6Q96KE9 485 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MSLNLQ96KJ4 702 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 POPDC2Q9HBU9 364 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MRPL47Q9HD33 250 aaKnown RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 ASAH2Q9NR71 780 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
RFFL-210ENST00000582308 CLIC5Q9NZA1 410 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 TRPM5Q9NZQ8 1165 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 CTTNBP2NLQ9P2B4 639 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 NUDT5Q9UKK9 219 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 NAALADL1Q9UQQ1 740 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 PAXBP1Q9Y5B6 917 aa9.98□□□□□ -0.81
RFFL-210ENST00000582308 NUP210Q8TEM1 1887 aaPredicted RBP9.98□□□□□ -0.81
RFFL-210ENST00000582308 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 MACROD2A1Z1Q3 448 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 ZSCAN12O43309 604 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 BUB1O43683 1085 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 DAB1O75553 588 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 TBX18O95935 607 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 NCAM1P13591 858 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 RARGP13631 454 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 FOSL2P15408 326 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 PDGFRAP16234 1089 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 TFE3P19532 575 aaPredicted RBP9.97□□□□□ -0.81
RFFL-210ENST00000582308 CDC25CP30307 473 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 NOS2P35228 1153 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 MATKP42679 507 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 NOP2P46087 812 aaKnown RBP9.97□□□□□ -0.81
RFFL-210ENST00000582308 PPP3CCP48454 512 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 PITX1P78337 314 aaPredicted RBP9.97□□□□□ -0.81
RFFL-210ENST00000582308 CYP4F8P98187 520 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 PABPC1LQ4VXU2 614 aaKnown RBP9.97□□□□□ -0.81
RFFL-210ENST00000582308 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 BTBD8Q5XKL5 378 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 MSANTD2Q6P1R3 559 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 POTEHQ6S545 545 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 TXLNBQ8N3L3 684 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 ZNF276Q8N554 614 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 LEMD2Q8NC56 503 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 TPCN2Q8NHX9 752 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 NT5C3BQ969T7 300 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 NPY6RQ99463 290 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 DDX23Q9BUQ8 820 aaKnown RBP9.97□□□□□ -0.81
RFFL-210ENST00000582308 TSGA10Q9BZW7 698 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 ADAM7Q9H2U9 754 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 CCSER2Q9H7U1 834 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 LZTFL1Q9NQ48 299 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 KCND1Q9NSA2 647 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 ABCC13Q9NSE7 274 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms