RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MED4Q9NPJ6 270 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 WHRNQ9P202 907 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.04
MKS1-211ENST00000581761 KRT14P02533 472 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 TFE3P19532 575 aaPredicted RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 GGCXP38435 758 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 MATKP42679 507 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 GATMP50440 423 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 CACNA2D1P54289 1103 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 DHX9Q08211 1270 aaKnown RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 CALCOCO2Q13137 446 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 MMRN1Q13201 1228 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 MTMR3Q13615 1198 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 BYSLQ13895 437 aaKnown RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 TFDP2Q14188 446 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 TCTN1Q2MV58 587 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 TMEM240Q5SV17 173 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 MAP7D3Q8IWC1 876 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 OR10T2Q8NGX3 314 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 CENPIQ92674 756 aaPredicted RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 ART4Q93070 314 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 SNF8Q96H20 258 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 ZIM3Q96PE6 472 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 PKMYT1Q99640 499 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 RHOBTB2Q9BYZ6 727 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 TMLHEQ9NVH6 421 aa15.26■□□□□ 0.03
MKS1-211ENST00000581761 DRG1Q9Y295 367 aaKnown RBP15.26■□□□□ 0.03
MKS1-211ENST00000581761 AGPSO00116 658 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 MDM4O15151 490 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 POLR3GO15318 223 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 HOXA2O43364 376 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 TRAPPC3O43617 180 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 OPA1O60313 960 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 TADA2AO75478 443 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ENDOD1O94919 500 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 BDNFP23560 247 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 NOS2P35228 1153 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ADCY8P40145 1251 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 VPS41P49754 854 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 DAOAP59103 153 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 YWHAZP63104 245 aaKnown RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 YWHAHQ04917 246 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 PPIGQ13427 754 aaKnown RBP eCLIP15.25■□□□□ 0.034e-6■□□□□ 8.2
MKS1-211ENST00000581761 CA9Q16790 459 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ZC3H12AQ5D1E8 599 aaKnown RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 RAB41Q5JT25 222 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ERMARDQ5T6L9 678 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 STRADAQ7RTN6 431 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 GPRIN1Q7Z2K8 1008 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 TMC3Q7Z5M5 1100 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 SPATA2LQ8IUW3 424 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 ALLCQ8N6M5 410 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 ACTL9Q8TC94 416 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 FBXO25Q8TCJ0 367 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 UBLCP1Q8WVY7 318 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 NKD2Q969F2 451 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 CASD1Q96PB1 797 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 SLC2A13Q96QE2 648 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 KCNK16Q96T55 309 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 NRDE2Q9H7Z3 1164 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 PCDH18Q9HCL0 1135 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 DMAP1Q9NPF5 467 aaPredicted RBP15.25■□□□□ 0.03
MKS1-211ENST00000581761 CNGB3Q9NQW8 809 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 STAP1Q9ULZ2 295 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 NEU2Q9Y3R4 380 aa15.25■□□□□ 0.03
MKS1-211ENST00000581761 HHLA1C9JL84 531 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 APOC4-APOC2K7ER74 178 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 NRP1O14786 923 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 PPFIA2O75334 1257 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
MKS1-211ENST00000581761 SYF2O95926 243 aaKnown RBP15.24■□□□□ 0.03
MKS1-211ENST00000581761 APOC2P02655 101 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 CXCL10P02778 98 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 ITIH2P19823 946 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 HSD17B3P37058 310 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 OASLQ15646 514 aaKnown RBP15.24■□□□□ 0.03
MKS1-211ENST00000581761 SLC25A52Q3SY17 297 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 DCAF6Q58WW2 860 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 C4orf50Q6ZRC1 276 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 HFE2Q6ZVN8 426 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 DEFB123Q8N688 67 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 GOLGA6L1Q8N7Z2 621 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 CCDC89Q8N998 374 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 BBOF1Q8ND07 529 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 SLC35B2Q8TB61 432 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 CCHCR1Q8TD31 782 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 PIK3R5Q8WYR1 880 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 RNF157Q96PX1 679 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms