RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF606Q8WXB4 792 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 ACSF2Q96CM8 615 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 NOX5Q96PH1 765 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 SLITRK1Q96PX8 696 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 KCNK16Q96T55 309 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 PDCL3Q9H2J4 239 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 FBXO44Q9H4M3 255 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 L2HGDHQ9H9P8 463 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 HCFC1R1Q9NWW0 138 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 ZMYM5Q9UJ78 669 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 FBXL21Q9UKT6 434 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 PCDHGC3Q9UN70 934 aa14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 MAGED2Q9UNF1 606 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 ZFP37Q9Y6Q3 630 aaPredicted RBP14.18□□□□□ -0.14
CSNK1D-220ENST00000581737 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 MYO16Q9Y6X6 1858 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 KRT37O76014 449 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 LMNAP02545 664 aaKnown RBP14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 CYP11B1P15538 503 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 HMGA1P17096 107 aaKnown RBP14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 YWHAQP27348 245 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 GABRR2P28476 465 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 ARHGAP25P42331 645 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 PLA2G4AP47712 749 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 PPP3CCP48454 512 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC5A3P53794 718 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 PDE4CQ08493 712 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 ARHGAP15Q53QZ3 475 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC47A2Q86VL8 602 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 CEP112Q8N8E3 955 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 ZMIZ2Q8NF64 920 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 EPS8L1Q8TE68 723 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 OVCA2Q8WZ82 227 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 CA14Q9ULX7 337 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 DENND4CQ5VZ89 1909 aa14.17□□□□□ -0.14
CSNK1D-220ENST00000581737 NCANO14594 1321 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 DOCK8Q8NF50 2099 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 BTNL10A8MVZ5 291 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 TNFRSF10BO14763 440 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 BEST1O76090 585 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 DCNP07585 359 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 PLEKP08567 350 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 TNFAIP3P21580 790 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 DDX6P26196 483 aaKnown RBP eCLIP14.16□□□□□ -0.143e-8■■□□□ 12.5
CSNK1D-220ENST00000581737 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 SNX16P57768 344 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 NTHL1P78549 312 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 CKAP4Q07065 602 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 WHAMMP3Q1A5X7 153 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 ASTE1Q2TB18 679 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 PKDCCQ504Y2 493 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 PRSS36Q5K4E3 855 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 TRIM72Q6ZMU5 477 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 GET4Q7L5D6 327 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 PIGZQ86VD9 579 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC35F6Q8N357 371 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 UBA3Q8TBC4 463 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 STK32AQ8WU08 396 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 MRPS31Q92665 395 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 FBXO32Q969P5 355 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 HSFY1Q96LI6 401 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 MYADMQ96S97 322 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 ZSWIM1Q9BR11 485 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 LRRC3Q9BY71 257 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 LHX5Q9H2C1 402 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 LRRC4Q9HBW1 653 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 CYLDQ9NQC7 956 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 IL37Q9NZH6 218 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 TRPM5Q9NZQ8 1165 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 REXO2Q9Y3B8 237 aaKnown RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 EP300Q09472 2414 aaPredicted RBP14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 NCOR2Q9Y618 2525 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 OBSL1O75147 1896 aa14.16□□□□□ -0.14
CSNK1D-220ENST00000581737 SOBPA7XYQ1 873 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 STK25O00506 426 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 LSM8O95777 96 aaKnown RBP14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 CALCAP01258 141 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 H2AFZP0C0S5 128 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 GLULP15104 373 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 ACADSBP45954 432 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 CDR2Q01850 454 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 IFRD2Q12894 506 aaPredicted RBP14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 DENND1BQ6P3S1 775 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 H2AFVQ71UI9 128 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 IRF2BP2Q7Z5L9 587 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 SIX6OS1Q8N1H7 587 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC44A3Q8N4M1 653 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 TMEM35BQ8NCS4 154 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 MSANTD4Q8NCY6 345 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 SHKBP1Q8TBC3 707 aa14.15□□□□□ -0.14
CSNK1D-220ENST00000581737 SLC35F5Q8WV83 523 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms