RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TKTL1P51854 596 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 LY6G5CQ5SRR4 150 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 LCLAT1Q6UWP7 414 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 HTR3DQ70Z44 454 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 IRF2BP1Q8IU81 584 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 ARHGAP18Q8N392 663 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 SUMF1Q8NBK3 374 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 TFAP2BQ92481 460 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 EZH1Q92800 747 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-220ENST00000581707 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 CDK5RAP1Q96SZ6 601 aaKnown RBP20.5■□□□□ 0.87
SREBF1-220ENST00000581707 GVINP1Q7Z2Y8 2422 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 ZNF292O60281 2723 aa20.5■□□□□ 0.87
SREBF1-220ENST00000581707 FRYLO94915 3013 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 CFAP54Q96N23 3096 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 CHURC1-FNTBB4DL54 471 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 MDM4O15151 490 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 ZBED1O96006 694 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 CNGA2Q16280 664 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 PM20D1Q6GTS8 502 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 RBBP8NLQ8NC74 664 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-220ENST00000581707 KREMEN1Q96MU8 473 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 CRACR2AQ9BSW2 395 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 LRRC4Q9HBW1 653 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 UBE2TQ9NPD8 197 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-220ENST00000581707 DACH1Q9UI36 760 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 LSM7Q9UK45 103 aaKnown RBP20.49■□□□□ 0.87
SREBF1-220ENST00000581707 OTOGLQ3ZCN5 2332 aa20.49■□□□□ 0.87
SREBF1-220ENST00000581707 GREM1O60565 184 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 SETSIPP0DME0 302 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 HOXA6P31267 233 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 MTIF2P46199 727 aaKnown RBP20.48■□□□□ 0.87
SREBF1-220ENST00000581707 SLC6A11P48066 632 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 FNTBP49356 437 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 YWHAGP61981 247 aaKnown RBP eCLIP20.48■□□□□ 0.87
SREBF1-220ENST00000581707 DMWDQ09019 674 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 STILQ15468 1287 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 PKDCCQ504Y2 493 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 HEATR6Q6AI08 1181 aaKnown RBP20.48■□□□□ 0.87
SREBF1-220ENST00000581707 MIB1Q86YT6 1006 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 RPLP0P6Q8NHW5 317 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 CCDC26Q8TAB7 109 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 PNKPQ96T60 521 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 ULBP1Q9BZM6 244 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 THAP9Q9H5L6 903 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 SPHK2Q9NRA0 654 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 SLC8A2Q9UPR5 921 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 GPR179Q6PRD1 2367 aa20.48■□□□□ 0.87
SREBF1-220ENST00000581707 BRD2P25440 801 aaKnown RBP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 ERCC5P28715 1186 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 EIF2DP41214 584 aaKnown RBP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 ZNF132P52740 706 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 GAD2Q05329 585 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 ADIGQ0VDE8 80 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 BTBD8Q5XKL5 378 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 LONP2Q86WA8 852 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 TMEM25Q86YD3 366 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 KCTD13Q8WZ19 329 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 NDRG1Q92597 394 aaKnown RBP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 IPO9Q96P70 1041 aaKnown RBP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 ZSWIM1Q9BR11 485 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 EPC1Q9H2F5 836 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.47■□□□□ 0.87
SREBF1-220ENST00000581707 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
SREBF1-220ENST00000581707 K7EQS6 105 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 HOXC11O43248 304 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-220ENST00000581707 CALCAP01258 141 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 APODP05090 189 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 KRT5P13647 590 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 HOXC13P31276 330 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 COG7P83436 770 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 EFEMP1Q12805 493 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 GBP6Q6ZN66 633 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 RSRC2Q7L4I2 434 aaKnown RBP20.46■□□□□ 0.87
SREBF1-220ENST00000581707 ENOSF1Q7L5Y1 443 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 C12orf40Q86WS4 652 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 FAM114A1Q8IWE2 563 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 SIX6OS1Q8N1H7 587 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 SLC35F5Q8WV83 523 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 RASAL2Q9UJF2 1139 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 KIAA1549LQ6ZVL6 1849 aa20.46■□□□□ 0.87
SREBF1-220ENST00000581707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-220ENST00000581707 M0QYV0 167 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 STC2O76061 302 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 SLC9A1P19634 815 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 MFAP3P55082 362 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 SEC13P55735 322 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 EXOC3L4Q17RC7 722 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 ANO4Q32M45 955 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 TRIM65Q6PJ69 517 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 SYT13Q7L8C5 426 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 BHLHA9Q7RTU4 235 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 NAT16Q8N8M0 369 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 GPT2Q8TD30 523 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 USP33Q8TEY7 942 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 RUBCNQ92622 972 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 SECISBP2LQ93073 1101 aaKnown RBP20.45■□□□□ 0.86
SREBF1-220ENST00000581707 ACDQ96AP0 544 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms