RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DUSP16Q9BY84 665 aa22.06■■□□□ 1.12
CCDC42-203ENST00000581598 ARHGEF4Q9NR80 690 aa22.06■■□□□ 1.12
CCDC42-203ENST00000581598 SPHK2Q9NRA0 654 aa22.06■■□□□ 1.12
CCDC42-203ENST00000581598 COQ4Q9Y3A0 265 aa22.06■■□□□ 1.12
CCDC42-203ENST00000581598 MYO18AQ92614 2054 aaKnown RBP22.06■■□□□ 1.12
CCDC42-203ENST00000581598 GREM1O60565 184 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 ZNF806P0C7X5 589 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 ACO1P21399 889 aaKnown RBP22.05■■□□□ 1.12
CCDC42-203ENST00000581598 KIR2DL1P43626 348 aaPredicted RBP22.05■■□□□ 1.12
CCDC42-203ENST00000581598 PSEN1P49768 467 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 DGKEP52429 567 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 SEC13P55735 322 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 FKBP3Q00688 224 aaKnown RBP22.05■■□□□ 1.12
CCDC42-203ENST00000581598 MESP2Q0VG99 397 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 CRY1Q16526 586 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 PPP1R26Q5T8A7 1209 aaPredicted RBP22.05■■□□□ 1.12
CCDC42-203ENST00000581598 CCDC186Q7Z3E2 898 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 C11orf74Q86VG3 221 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 CNOT6LQ96LI5 555 aaKnown RBP22.05■■□□□ 1.12
CCDC42-203ENST00000581598 UBXN6Q9BZV1 441 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 ARRDC1-AS1Q9H2J1 176 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 OSER1Q9NX31 292 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 TMEM63CQ9P1W3 806 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 USP3Q9Y6I4 520 aa22.05■■□□□ 1.12
CCDC42-203ENST00000581598 CYP26A1O43174 497 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 LRRC63Q05C16 580 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 GOLGA8FQ08AF8 430 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 GOLGA8DPQ0D2H9 430 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 PLA2G2CQ5R387 149 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 CCDC183Q5T5S1 534 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 BTBD8Q5XKL5 378 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 IL17RCQ8NAC3 791 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 KCNV2Q8TDN2 545 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 WBP2Q969T9 261 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 EEF2KMTQ96G04 330 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 NUP62CLQ9H1M0 184 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 DUSP15Q9H1R2 295 aaPredicted RBP22.04■■□□□ 1.12
CCDC42-203ENST00000581598 NMUR1Q9HB89 426 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 CISHQ9NSE2 258 aa22.04■■□□□ 1.12
CCDC42-203ENST00000581598 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.04■■□□□ 1.12
CCDC42-203ENST00000581598 HOOK1Q9UJC3 728 aaKnown RBP22.04■■□□□ 1.12
CCDC42-203ENST00000581598 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.03■■□□□ 1.12
CCDC42-203ENST00000581598 RHOBTB1O94844 696 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 TBX18O95935 607 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 LIMK1P53667 647 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 ELF2Q15723 593 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 ANKRD40Q6AI12 368 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
CCDC42-203ENST00000581598 TADA2BQ86TJ2 420 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 SLC4A11Q8NBS3 891 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 SMARCE1Q969G3 411 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 TMEM176AQ96HP8 235 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 HEXIM2Q96MH2 286 aaKnown RBP22.03■■□□□ 1.12
CCDC42-203ENST00000581598 CLIC5Q9NZA1 410 aa22.03■■□□□ 1.12
CCDC42-203ENST00000581598 LSM7Q9UK45 103 aaKnown RBP22.03■■□□□ 1.12
CCDC42-203ENST00000581598 A0A1W2PQH9 124 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 ANTXRLA6NF34 631 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 TULP3O75386 442 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 IRF1P10914 325 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 RARGP13631 454 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 PLA2G4AP47712 749 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 RAD23BP54727 409 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 ZNF394Q53GI3 561 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 USP39Q53GS9 565 aaKnown RBP22.02■■□□□ 1.12
CCDC42-203ENST00000581598 EOGTQ5NDL2 527 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 ARHGAP17Q68EM7 881 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 RBM43Q6ZSC3 357 aaKnown RBP22.02■■□□□ 1.12
CCDC42-203ENST00000581598 TMEM25Q86YD3 366 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 SFTPA1Q8IWL2 248 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 CCDC33Q8N5R6 958 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 ALLCQ8N6M5 410 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 JAKMIP2Q96AA8 810 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 CDK5RAP1Q96SZ6 601 aaKnown RBP22.02■■□□□ 1.12
CCDC42-203ENST00000581598 MARK1Q9P0L2 795 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 DEC1Q9P2X7 70 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 DNMT3LQ9UJW3 386 aa22.02■■□□□ 1.12
CCDC42-203ENST00000581598 NUP205Q92621 2012 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 NCOR2Q9Y618 2525 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 ALDH1A2O94788 518 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 KLF8O95600 359 aaPredicted RBP22.01■■□□□ 1.11
CCDC42-203ENST00000581598 PMS1P54277 932 aaKnown RBP22.01■■□□□ 1.11
CCDC42-203ENST00000581598 KDSRQ06136 332 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 CBWD6Q4V339 395 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 CBWD3Q5JTY5 395 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 CBWD5Q5RIA9 395 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 TCERG1LQ5VWI1 586 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 TMEM92Q6UXU6 159 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 NUDT18Q6ZVK8 323 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 SCD5Q86SK9 330 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 TERB1Q8NA31 727 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 TXNDC5Q8NBS9 432 aaKnown RBP22.01■■□□□ 1.11
CCDC42-203ENST00000581598 MDGA1Q8NFP4 955 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 OLIG1Q8TAK6 271 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 TATDN2Q93075 761 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 VPS45Q9NRW7 570 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 STARD13Q9Y3M8 1113 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 PLXND1Q9Y4D7 1925 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 ABCA7Q8IZY2 2146 aa22.01■■□□□ 1.11
CCDC42-203ENST00000581598 THADAQ6YHU6 1953 aa22■■□□□ 1.11
CCDC42-203ENST00000581598 SGK1O00141 431 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms