RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMG8-205ENST00000580798 GEN1Q17RS7 908 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 C10orf76Q5T2E6 689 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 FOXR2Q6PJQ5 311 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 CRELD2Q6UXH1 353 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 DSTYKQ6XUX3 929 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SEM1Q6ZVN7 128 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SPATS2Q86XZ4 545 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 TPH2Q8IWU9 490 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 CCDC65Q8IXS2 484 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 COLGALT2Q8IYK4 626 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 LRRC43Q8N309 656 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SUN5Q8TC36 379 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 CASKIN2Q8WXE0 1202 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 PTCD3Q96EY7 689 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 LTV1Q96GA3 475 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 MARS2Q96GW9 593 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 RADILQ96JH8 1075 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SLX1AQ9BQ83 275 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 HEPHQ9BQS7 1158 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 RHOXF2Q9BQY4 288 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 KATNAL1Q9BW62 490 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 CCDC8Q9H0W5 538 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 VPS37BQ9H9H4 285 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 UNKLQ9H9P5 680 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 TRMT13Q9NUP7 481 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 CWC15Q9P013 229 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 HSFX1Q9UBD0 423 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SAP30BPQ9UHR5 308 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 SH3BGRL2Q9UJC5 107 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 TRHDEQ9UKU6 1024 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 MTUS1Q9ULD2 1270 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 ZBTB21Q9ULJ3 1066 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 RUVBL1Q9Y265 456 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 MTO1Q9Y2Z2 717 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 C2CD2Q9Y426 696 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 N6AMT1Q9Y5N5 214 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 EIF4G1Q04637 1599 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 RRN3P2A6NIE6 340 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 AKR1B15C9JRZ8 316 aaPredicted RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 TP73O15350 636 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 NCAM2O15394 837 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 TEX33O43247 280 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 KLHL41O60662 606 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 ZBED4O75132 1171 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 ENDOD1O94919 500 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 CKBP12277 381 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 GSPT1P15170 499 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 PSMA4P25789 261 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 CYP2C19P33261 490 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 NOMO3P69849 1222 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 NUCB2P80303 420 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 MGAT2Q10469 447 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 GTF2H3Q13889 308 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 GRM3Q14832 879 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 RASA2Q15283 850 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 PPP1R7Q15435 360 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 CNGA3Q16281 694 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 ANO4Q32M45 955 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 C5orf22Q49AR2 442 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 SETMARQ53H47 684 aaPredicted RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 NOMO2Q5JPE7 1267 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 SYDE2Q5VT97 1194 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 CCDC80Q76M96 950 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 TMEM57Q8N5G2 664 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 DRAXINQ8NBI3 349 aaPredicted RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 OR52K2Q8NGK3 314 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 FBXO30Q8TB52 745 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 NSUN6Q8TEA1 469 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 USP13Q92995 863 aaPredicted RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 ATP2A3Q93084 1043 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 BICD1Q96G01 975 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 JAKMIP1Q96N16 626 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 TIMP4Q99727 224 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 SDF4Q9BRK5 362 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 UTP14AQ9BVJ6 771 aaKnown RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 LRRCC1Q9C099 1032 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 CCDC68Q9H2F9 335 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 TAOK3Q9H2K8 898 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 CCM2LQ9NUG4 571 aaPredicted RBP4.37□□□□□ -1.71
SMG8-205ENST00000580798 TCP11L1Q9NUJ3 509 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 C14orf119Q9NWQ9 140 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 ANKRD6Q9Y2G4 727 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 CRYL1Q9Y2S2 319 aa4.37□□□□□ -1.71
SMG8-205ENST00000580798 M0R3H8 397 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 P4HA2O15460 535 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 GPR39O43194 453 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 GPR32O75388 356 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 DDHD2O94830 711 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 MT-ND3P03897 115 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 DNTTP04053 509 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
SMG8-205ENST00000580798 PYGLP06737 847 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms