RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NDRG2Q9UN36 371 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 PIAS3Q9Y6X2 628 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 GFRA3O60609 400 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 TADA3O75528 432 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 LSM8O95777 96 aaKnown RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZDHHC11BP0C7U3 371 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 YWHAQP27348 245 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 KRT9P35527 623 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 AVPR1AP37288 418 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 PRKCIP41743 596 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ACADSBP45954 432 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 RPS9P46781 194 aaKnown RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 PSEN1P49768 467 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 TUBP50607 506 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 KPNA1P52294 538 aaPredicted RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 USP46P62068 366 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZBED6P86452 979 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 TXNDC8Q6A555 127 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZNF397Q8NF99 534 aaPredicted RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 FAM3CQ92520 227 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 MRFAP1L1Q96HT8 127 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZFYVE19Q96K21 471 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 C8orf33Q9H7E9 229 aaPredicted RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 CNGB3Q9NQW8 809 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 SPATA6Q9NWH7 488 aaPredicted RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 THG1LQ9NWX6 298 aaKnown RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 NOCTQ9UK39 431 aaKnown RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 SCML2Q9UQR0 700 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZFHX4Q86UP3 3567 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 ZFHX2Q9C0A1 2572 aaPredicted RBP10.4□□□□□ -0.74
GGA3-209ENST00000580646 COL4A3Q01955 1670 aa10.4□□□□□ -0.74
GGA3-209ENST00000580646 F5P12259 2224 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 LRRC53A6NM62 1247 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 LAMTOR5O43504 91 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 GFPT2O94808 682 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 GYPCP04921 128 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 SP9P0CG40 484 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 PNMA6AP0CW24 399 aaPredicted RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 SNX16P57768 344 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 CDR2Q01850 454 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TAF10Q12962 218 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 PM20D1Q6GTS8 502 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 PPP1R2P3Q6NXS1 205 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TRIM72Q6ZMU5 477 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 ASCL5Q7RTU5 278 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 GPRIN1Q7Z2K8 1008 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 IRF2BP2Q7Z5L9 587 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TMEM110Q86TL2 294 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 NOP9Q86U38 636 aaKnown RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 UBA3Q8TBC4 463 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 IPO4Q8TEX9 1081 aaKnown RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 IRGQQ8WZA9 623 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 USP13Q92995 863 aaPredicted RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 SECISBP2LQ93073 1101 aaKnown RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 NKD2Q969F2 451 aaPredicted RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 FBXO32Q969P5 355 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 MSANTD3Q96H12 275 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 NOX5Q96PH1 765 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 LMAN1LQ9HAT1 526 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 LRRC4Q9HBW1 653 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 ACP6Q9NPH0 428 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 TRPM5Q9NZQ8 1165 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 CCL26Q9Y258 94 aa10.39□□□□□ -0.75
GGA3-209ENST00000580646 LUC7L2Q9Y383 392 aaKnown RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 BZW2Q9Y6E2 419 aaKnown RBP10.39□□□□□ -0.75
GGA3-209ENST00000580646 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 PRR23AA6NEV1 266 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TULP2O00295 520 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 SART1O43290 800 aaKnown RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 AP5Z1O43299 807 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 FBXO21O94952 628 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 OLFM2O95897 454 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 CHRNB1P11230 501 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TCF3P15923 654 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 HNRNPH3P31942 346 aaKnown RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 SOX9P48436 509 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TKTL1P51854 596 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TNK2Q07912 1038 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 ZNF268Q14587 947 aaPredicted RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 SFMBT2Q5VUG0 894 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 PMF1Q6P1K2 205 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 DENND1BQ6P3S1 775 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 KLHDC10Q6PID8 442 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 C1orf228Q6PIY5 440 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 RALGPS2Q86X27 583 aaPredicted RBP10.38□□□□□ -0.75
GGA3-209ENST00000580646 DRC7Q8IY82 874 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 ARHGAP18Q8N392 663 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 TMEM35BQ8NCS4 154 aa10.38□□□□□ -0.75
GGA3-209ENST00000580646 SCAMP5Q8TAC9 235 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms