RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CSPG5O95196 566 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ECEL1O95672 775 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RPL17P18621 184 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HNRNPH1P31943 449 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC1A1P43005 524 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ATXN1P54253 815 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SKOR1P84550 965 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TRIP13Q15645 432 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PRSS55Q6UWB4 352 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TMEM199Q8N511 208 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RXFP2Q8WXD0 754 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HERPUD2Q9BSE4 406 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CWH43Q9H720 699 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PCYOX1Q9UHG3 505 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
CDK5RAP3-217ENST00000580287 E7EVH7 732 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SOAT2O75908 522 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PDGFRAP16234 1089 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IL1R2P27930 398 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MAGOHP61326 146 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PLCB3Q01970 1234 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KRT71Q3SY84 523 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM171BQ6P995 826 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KDM7AQ6ZMT4 941 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GPR152Q8TDT2 470 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PKMYT1Q99640 499 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ASIC3Q9UHC3 531 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CHD9Q3L8U1 2897 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLCO1A2P46721 670 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 VPS41P49754 854 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PITX1P78337 314 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC6A3Q01959 620 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SIX1Q15475 284 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ATAD1Q8NBU5 361 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SCAMP5Q8TAC9 235 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 VN1R3Q9BXE9 311 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZWILCHQ9H900 591 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZDHHC18Q9NUE0 388 aa13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DNAJC17Q9NVM6 304 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ABHD14A-ACY1A0A1B0GW23 586 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADAM12O43184 909 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HOXA2O43364 376 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 LRCH4O75427 683 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 USP17L7P0C7H9 530 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RALAP11233 206 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GPR15P49685 360 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TKTL1P51854 596 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KRT17Q04695 432 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KAZNQ674X7 775 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DSEQ9UL01 958 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 C2CD4BA6NLJ0 364 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TRAPPC3O43617 180 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PMS2P54278 862 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADCY1Q08828 1119 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 BTG3Q14201 252 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 LRIG3Q6UXM1 1119 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 EPB41L4BQ9H329 900 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GRHL1Q9NZI5 618 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 WDR35Q9P2L0 1181 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TANC1Q9C0D5 1861 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HMGB1P1B2RPK0 211 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FSCN2O14926 492 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 OAZ2O95190 189 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM163BP0C2L3 166 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TYMPP19971 482 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FNTAP49354 379 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PGFP49763 221 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DDR2Q16832 855 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCDC14Q49A88 953 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZDHHC24Q6UX98 284 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms