RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 POLR3BQ9NW08 1133 aaPredicted RBP12.17□□□□□ -0.46
SSH2-208ENST00000579040 LSM7Q9UK45 103 aaKnown RBP12.17□□□□□ -0.46
SSH2-208ENST00000579040 COQ4Q9Y3A0 265 aa12.17□□□□□ -0.46
SSH2-208ENST00000579040 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.17□□□□□ -0.46
SSH2-208ENST00000579040 NCOR2Q9Y618 2525 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 CEP192Q8TEP8 1941 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 PSMA7O14818 248 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 SLC30A4O14863 429 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 RHOBTB1O94844 696 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 SLC6A11P48066 632 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 PGFP49763 221 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 ATXN1P54253 815 aaKnown RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 ELF2Q15723 593 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 CRY1Q16526 586 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 PLK5Q496M5 336 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 ARHGAP17Q68EM7 881 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 PHTF2Q8N3S3 785 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 EEF2KMTQ96G04 330 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 CNOT6LQ96LI5 555 aaKnown RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 HEXIM2Q96MH2 286 aaKnown RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
SSH2-208ENST00000579040 CLIC5Q9NZA1 410 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
SSH2-208ENST00000579040 DNMT3LQ9UJW3 386 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 PI4KAP42356 2102 aa12.16□□□□□ -0.46
SSH2-208ENST00000579040 A0A1W2PQH9 124 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 MED19A0JLT2 244 aaPredicted RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 GREM1O60565 184 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 TULP3O75386 442 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 ALDH1A2O94788 518 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 KLF8O95600 359 aaPredicted RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 TBX18O95935 607 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 ZNF806P0C7X5 589 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 IRF1P10914 325 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 RALAP11233 206 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 RARGP13631 454 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 RAD23BP54727 409 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 SLC8A3P57103 927 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 KDSRQ06136 332 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 MESP2Q0VG99 397 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 CBWD6Q4V339 395 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 CBWD3Q5JTY5 395 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 EOGTQ5NDL2 527 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 CBWD5Q5RIA9 395 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 TRMT11Q7Z4G4 463 aaKnown RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 CCDC33Q8N5R6 958 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 IL17RCQ8NAC3 791 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 WBP2Q969T9 261 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 ARID3AQ99856 593 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 ARRDC1-AS1Q9H2J1 176 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 NMUR1Q9HB89 426 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
SSH2-208ENST00000579040 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 MARK1Q9P0L2 795 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 WDR35Q9P2L0 1181 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 DEC1Q9P2X7 70 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 NAGPAQ9UK23 515 aa12.15□□□□□ -0.46
SSH2-208ENST00000579040 TNRC6BQ9UPQ9 1833 aaKnown RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 CACNG3O60359 315 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 TIE1P35590 1138 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 MPLP40238 635 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 LIMK1P53667 647 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 CUL2Q13617 745 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 ANO4Q32M45 955 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 PLA2G2CQ5R387 149 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 ANO7Q6IWH7 933 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 Q6ZNB5 142 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 TMEM25Q86YD3 366 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 SFTPA1Q8IWL2 248 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 ALLCQ8N6M5 410 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 TERB1Q8NA31 727 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 C12orf50Q8NA57 414 aaPredicted RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 ANKRD52Q8NB46 1076 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms