RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 PCDHGA5Q9Y5G8 931 aa18.49■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DNAH14Q0VDD8 3507 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SLC30A4O14863 429 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DCLK1O15075 740 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 ZNF806P0C7X5 589 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 RALAP11233 206 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 RARGP13631 454 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PRCPP42785 496 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PSEN1P49768 467 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 FKBP3Q00688 224 aaKnown RBP18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 STIM1Q13586 685 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CRY1Q16526 586 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 C10orf120Q5SQS8 335 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PPP1R26Q5T8A7 1209 aaPredicted RBP18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 GPRIN1Q7Z2K8 1008 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 TRMT11Q7Z4G4 463 aaKnown RBP18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PGBD3Q8N328 593 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 XPO6Q96QU8 1125 aaKnown RBP18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DUSP16Q9BY84 665 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CISHQ9NSE2 258 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DNMT3LQ9UJW3 386 aa18.48■□□□□ 0.55
SLC9A3R1-203ENST00000578958 RALGAPA1Q6GYQ0 2036 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 A0A1W2PQH9 124 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SLC16A3O15427 465 aaKnown RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 ZBTB24O43167 697 aaPredicted RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 HOXC11O43248 304 aaPredicted RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 GDF9O60383 454 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 MPLP40238 635 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PLA2G4AP47712 749 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CREB5Q02930 508 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 HTR3DQ70Z44 454 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 TMEM25Q86YD3 366 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 WHAMMQ8TF30 809 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SEMA4DQ92854 862 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 TMEM176AQ96HP8 235 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SPACA7Q96KW9 195 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CNOT6LQ96LI5 555 aaKnown RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CDK5RAP1Q96SZ6 601 aaKnown RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DUSP9Q99956 384 aaKnown RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 KLF16Q9BXK1 252 aaPredicted RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DUSP15Q9H1R2 295 aaPredicted RBP18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CYLDQ9NQC7 956 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 VPS45Q9NRW7 570 aa18.47■□□□□ 0.55
SLC9A3R1-203ENST00000578958 HHLA1C9JL84 531 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 NEDD8-MDP1E9PL57 170 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 MAP3K13O43283 966 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 TULP3O75386 442 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 PGFP49763 221 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 KIF11P52732 1056 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 C10orf76Q5T2E6 689 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 EMC10Q5UCC4 262 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 GRAMD4Q6IC98 578 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 TPGS1Q6ZTW0 290 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 SFTPA1Q8IWL2 248 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 IL17RCQ8NAC3 791 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 BBS2Q9BXC9 721 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 DNAJC17Q9NVM6 304 aaKnown RBP18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 WDR35Q9P2L0 1181 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 NUDT5Q9UKK9 219 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 CACNA1AO00555 2505 aa18.46■□□□□ 0.55
SLC9A3R1-203ENST00000578958 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 SGK1O00141 431 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 LRRC63Q05C16 580 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ANKRD40Q6AI12 368 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 SDE2Q6IQ49 451 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 CCDC186Q7Z3E2 898 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 RASSF3Q86WH2 238 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 MIB1Q86YT6 1006 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ARHGAP18Q8N392 663 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ZNF513Q8N8E2 541 aaPredicted RBP18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 MDGA1Q8NFP4 955 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 KCNV2Q8TDN2 545 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 WBP2Q969T9 261 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 FAM124BQ9H5Z6 455 aaPredicted RBP18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 NMUR1Q9HB89 426 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 OSER1Q9NX31 292 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ARMCX3Q9UH62 379 aaPredicted RBP18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 SDK1Q7Z5N4 2213 aa18.45■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ANTXRLA6NF34 631 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 PSMA7O14818 248 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 MDM4O15151 490 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 CAVIN2O95810 425 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 TYRP14679 529 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 BYSLQ13895 437 aaKnown RBP18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 COBLL1Q53SF7 1204 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 PPM1JQ5JR12 505 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 KLHDC10Q6PID8 442 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 TMEM92Q6UXU6 159 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 RSRC2Q7L4I2 434 aaKnown RBP18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ETFBKMTQ8IXQ9 262 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 TERB1Q8NA31 727 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 SLC4A11Q8NBS3 891 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 HMGB4Q8WW32 186 aa18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 ERCC4Q92889 916 aaPredicted RBP18.44■□□□□ 0.54
SLC9A3R1-203ENST00000578958 TATDN2Q93075 761 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms