RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 SUZ12Q15022 739 aaKnown RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 HLA-BQ31612 363 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 DYMQ7RTS9 669 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 LIMS2Q7Z4I7 341 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 PDCD7Q8N8D1 485 aaKnown RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 OR6B3Q8NGW1 331 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 BAHD1Q8TBE0 780 aaPredicted RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 DNASE2BQ8WZ79 361 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 OVCA2Q8WZ82 227 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 TOE1Q96GM8 510 aaKnown RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 GPR174Q9BXC1 333 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 NACA2Q9H009 215 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 PCIF1Q9H4Z3 704 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 CD248Q9HCU0 757 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 TOR4AQ9NXH8 423 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 WSB2Q9NYS7 404 aaPredicted RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 TBC1D7Q9P0N9 293 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 CHORDC1Q9UHD1 332 aaPredicted RBP9.68□□□□□ -0.86
PTPRM-210ENST00000578916 NFE2L3Q9Y4A8 694 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 PCDHGB2Q9Y5G2 931 aa9.68□□□□□ -0.86
PTPRM-210ENST00000578916 HELZP42694 1942 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 ANAPC1Q9H1A4 1944 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 FAM149AA5PLN7 773 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 PRRT4C9JH25 899 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 NEDD8-MDP1E9PL57 170 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 GFRA2O00451 464 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 DKK1O94907 266 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 GCNT3O95395 438 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 PTPN1P18031 435 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 CACNA2D1P54289 1103 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 STARD3Q14849 445 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 CCDC157Q569K6 752 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 DCAF12L1Q5VU92 463 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 METTL3Q86U44 580 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 ENGASEQ8NFI3 743 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 CADM4Q8NFZ8 388 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 PIP4K2CQ8TBX8 421 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 DUSP9Q99956 384 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 STRA6Q9BX79 667 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 BBS2Q9BXC9 721 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 CCSER2Q9H7U1 834 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 INTS13Q9NVM9 706 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 WDR35Q9P2L0 1181 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 SEL1LQ9UBV2 794 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 FNDC3AQ9Y2H6 1198 aaKnown RBP9.67□□□□□ -0.86
PTPRM-210ENST00000578916 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
PTPRM-210ENST00000578916 BPTFQ12830 3046 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 PLXNB3Q9ULL4 1909 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 WASH3PC4AMC7 463 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 E9PAM4 449 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 CLDN5O00501 218 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 CACNG3O60359 315 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 TYRP14679 529 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 GAP43P17677 238 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 PTMSP20962 102 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 OXTRP30559 389 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 LONP1P36776 959 aaKnown RBP9.66□□□□□ -0.86
PTPRM-210ENST00000578916 DGKGP49619 791 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 TUBP50607 506 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 CAMK2BQ13554 666 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 SURF1Q15526 300 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 SNX30Q5VWJ9 437 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 DBX2Q6ZNG2 339 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 TPGS1Q6ZTW0 290 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 ZNF605Q86T29 641 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 GPD1LQ8N335 351 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 OR5B17Q8NGF7 314 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 WBP2Q969T9 261 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 PLCD4Q9BRC7 762 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 CBWD1Q9BRT8 395 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 B3GNT5Q9BYG0 378 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 DPEP3Q9H4B8 488 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 ITM2CQ9NQX7 267 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 USP36Q9P275 1121 aaKnown RBP9.66□□□□□ -0.86
PTPRM-210ENST00000578916 STON1Q9Y6Q2 735 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 APC2O95996 2303 aa9.66□□□□□ -0.86
PTPRM-210ENST00000578916 HELZ2Q9BYK8 2649 aaKnown RBP9.66□□□□□ -0.86
PTPRM-210ENST00000578916 ACACAQ13085 2346 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 ATP8B3O60423 1300 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 A0A1B0GVT2 93 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 METTL12A8MUP2 240 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 A8MXQ7 604 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 H3BQV1 296 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 KIAA0391O15091 583 aaKnown RBP9.65□□□□□ -0.86
PTPRM-210ENST00000578916 ATXN7O15265 892 aaPredicted RBP9.65□□□□□ -0.86
PTPRM-210ENST00000578916 TNFSF14O43557 240 aa9.65□□□□□ -0.86
PTPRM-210ENST00000578916 SYNCRIPO60506 623 aaKnown RBP9.65□□□□□ -0.86
PTPRM-210ENST00000578916 TACC1O75410 805 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms