RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 GRIA4P48058 902 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 FOSBP53539 338 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 CACNA2D1P54289 1103 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 WNT7BP56706 349 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 BNIP3Q12983 259 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 SRSF6Q13247 344 aaKnown RBP11.81□□□□□ -0.52
GGA3-206ENST00000578773 KRT32Q14532 448 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 IGFBP7Q16270 282 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 BTBD8Q5XKL5 378 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 SDE2Q6IQ49 451 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 METTL3Q86U44 580 aaKnown RBP11.81□□□□□ -0.52
GGA3-206ENST00000578773 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 TMPRSS6Q8IU80 811 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 ENGASEQ8NFI3 743 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 BHMTQ93088 406 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 BIRC7Q96CA5 298 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 DDX43Q9NXZ2 648 aaKnown RBP11.81□□□□□ -0.52
GGA3-206ENST00000578773 TRPM5Q9NZQ8 1165 aa11.81□□□□□ -0.52
GGA3-206ENST00000578773 TISP43B9A030 160 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 NEDD8-MDP1E9PL57 170 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 WNT9AO14904 365 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 EFSO43281 561 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 XPOTO43592 962 aaKnown RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 MT-CO3P00414 261 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 IGLV3-19P01714 112 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 C1SP09871 688 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 CISD3P0C7P0 127 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 FAM87AP0C7U9 286 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 PSMC1P62191 440 aaKnown RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 NFE2Q16621 373 aaPredicted RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 SLC39A4Q6P5W5 647 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 KCNK18Q7Z418 384 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 SPATA2LQ8IUW3 424 aaPredicted RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 FBXL16Q8N461 479 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 RFFLQ8WZ73 363 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 EXTL1Q92935 676 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 SIPA1Q96FS4 1042 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 ZNF578Q96N58 590 aaPredicted RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 SLC6A18Q96N87 628 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
GGA3-206ENST00000578773 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
GGA3-206ENST00000578773 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 CPLX1O14810 134 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 COCHO43405 550 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 FSBPO95073 299 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 ITGAVP06756 1048 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 TYRP14679 529 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 BDNFP23560 247 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 PRKCHP24723 683 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 MCM7P33993 719 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 STRN3Q13033 797 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 TEAD4Q15561 434 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 INAVAQ3KP66 663 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 ZPBP2Q6X784 338 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 TPGS1Q6ZTW0 290 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 SCFD1Q8WVM8 642 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 KCNB2Q92953 911 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 MYLPFQ96A32 169 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 NUP58Q9BVL2 599 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 TTLL2Q9BWV7 592 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 IKZF4Q9H2S9 585 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 EBF2Q9HAK2 575 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 DPP3Q9NY33 737 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 PLK2Q9NYY3 685 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 CPSF3Q9UKF6 684 aaKnown RBP11.79□□□□□ -0.52
GGA3-206ENST00000578773 PCDHB6Q9Y5E3 794 aa11.79□□□□□ -0.52
GGA3-206ENST00000578773 POLQO75417 2590 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 OGTO15294 1046 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 CACNG3O60359 315 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 GREM1O60565 184 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
GGA3-206ENST00000578773 ACOT2P49753 483 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 PGFP49763 221 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 TAF10Q12962 218 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 SERINC3Q13530 473 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 RINT1Q6NUQ1 792 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 SORCS1Q8WY21 1168 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 BICD1Q96G01 975 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 ELF4Q99607 663 aaPredicted RBP11.78□□□□□ -0.52
GGA3-206ENST00000578773 ACBD6Q9BR61 282 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 CCSER2Q9H7U1 834 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 TBC1D14Q9P2M4 693 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
GGA3-206ENST00000578773 RBM19Q9Y4C8 960 aaKnown RBP11.78□□□□□ -0.52
GGA3-206ENST00000578773 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
GGA3-206ENST00000578773 OTOGQ6ZRI0 2925 aa11.77□□□□□ -0.52
GGA3-206ENST00000578773 RP1P56715 2156 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 NPHP3-ACAD11A0A0J9YXS1 232 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 PP2D1A8MPX8 630 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms