RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 WDR45BQ5MNZ6 344 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 KIAA1324Q6UXG2 1013 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 SV2BQ7L1I2 683 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GLRX5Q86SX6 157 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 ZCCHC9Q8N567 271 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 RDH13Q8NBN7 331 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 FOXJ1Q92949 421 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 TOE1Q96GM8 510 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GABRG3Q99928 467 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GPR174Q9BXC1 333 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 PANK2Q9BZ23 570 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 MIR1-1HGQ9H1L0 117 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GAREM1Q9H706 876 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 PRDM16Q9HAZ2 1276 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GMIPQ9P107 970 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 SEL1LQ9UBV2 794 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 SUSD2Q9UGT4 822 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 KIF3AQ9Y496 699 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GOLGA4Q13439 2230 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 A0A1B0GTW7 788 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 FAM149AA5PLN7 773 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 KCNJ18B7U540 433 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 GREM1O60565 184 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 RTN3O95197 1032 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 PRB1P04280 392 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 CISD3P0C7P0 127 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 TYRP14679 529 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 CD6P30203 668 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 CDH8P55286 799 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 HLA-BQ31612 363 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 SNX30Q5VWJ9 437 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 RRAGBQ5VZM2 374 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 PAQR9Q6ZVX9 377 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 HTR3DQ70Z44 454 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 GLIS3Q8NEA6 775 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 PDZD8Q8NEN9 1154 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 ADAM32Q8TC27 787 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 RHBDD1Q8TEB9 315 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 SCFD1Q8WVM8 642 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 DNASE2BQ8WZ79 361 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 CLIC6Q96NY7 704 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 XPO6Q96QU8 1125 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 BBS2Q9BXC9 721 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 ZDHHC5Q9C0B5 715 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 ELOVL4Q9GZR5 314 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 NACA2Q9H009 215 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 SCUBE2Q9NQ36 999 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 OLFML3Q9NRN5 406 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 TM7SF3Q9NS93 570 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 WSB2Q9NYS7 404 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 PLK2Q9NYY3 685 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
NPLOC4-220ENST00000576940 MEI4A8MW99 385 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 CILPO75339 1184 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 FLNBO75369 2602 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 FAM163BP0C2L3 166 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 ZDHHC11BP0C7U3 371 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 DLATP10515 647 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 NCAM1P13591 858 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 TNNI1P19237 187 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 SLC5A3P53794 718 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 SURF1Q15526 300 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 DCAF12L1Q5VU92 463 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 LARP1BQ659C4 914 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 WDR49Q8IV35 697 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 B3GALNT2Q8NCR0 500 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 KNL1Q8NG31 2342 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 ZNF516Q92618 1163 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 BHMTQ93088 406 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 ELMO3Q96BJ8 720 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 CCDC127Q96BQ5 260 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 P2RY11Q96G91 374 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 MED10Q9BTT4 135 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 KLF16Q9BXK1 252 aaPredicted RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 MKRN2Q9H000 416 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 ITM2CQ9NQX7 267 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 PANK4Q9NVE7 773 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 IL37Q9NZH6 218 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 HSPBP1Q9NZL4 362 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 FNDC3AQ9Y2H6 1198 aaKnown RBP10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 CLIC4Q9Y696 253 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 STON1Q9Y6Q2 735 aa10.71□□□□□ -0.69
NPLOC4-220ENST00000576940 FRMD3A2A2Y4 597 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 METTL12A8MUP2 240 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 KCNK3O14649 394 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 CACNG3O60359 315 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 BEST1O76090 585 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 DKK1O94907 266 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 BMP15O95972 392 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 HOXD13P35453 343 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 MATKP42679 507 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 DGKGP49619 791 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 MYL6P60660 151 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 TNNC1P63316 161 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms