RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RAPGEF1Q13905 1077 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 C11orf57Q6ZUT1 292 aaPredicted RBP16.02■□□□□ 0.16
SMG6-220ENST00000576218 KIAA1958Q8N8K9 716 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CD101Q93033 1021 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 OTUB2Q96DC9 234 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 OSER1Q9NX31 292 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 CLIC5Q9NZA1 410 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 USP3Q9Y6I4 520 aa16.02■□□□□ 0.16
SMG6-220ENST00000576218 KIF26AQ9ULI4 1882 aaPredicted RBP16.01■□□□□ 0.15
SMG6-220ENST00000576218 SHISA7A6NL88 538 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 PIK3R2O00459 728 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 CYP17A1P05093 508 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 HMBSP08397 361 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 ADH5P11766 374 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 DRD1P21728 446 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 APBA1Q02410 837 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 ANO4Q32M45 955 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 RAB41Q5JT25 222 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 SCD5Q86SK9 330 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
SMG6-220ENST00000576218 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
SMG6-220ENST00000576218 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 CNGB3Q9NQW8 809 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 OLA1Q9NTK5 396 aaKnown RBP16.01■□□□□ 0.15
SMG6-220ENST00000576218 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 FBXO4Q9UKT5 387 aa16.01■□□□□ 0.15
SMG6-220ENST00000576218 WDFY4Q6ZS81 3184 aa16■□□□□ 0.15
SMG6-220ENST00000576218 TRDMT1O14717 391 aaKnown RBP16■□□□□ 0.15
SMG6-220ENST00000576218 SP9P0CG40 484 aa16■□□□□ 0.15
SMG6-220ENST00000576218 PTMSP20962 102 aa16■□□□□ 0.15
SMG6-220ENST00000576218 CXCL12P48061 93 aa16■□□□□ 0.15
SMG6-220ENST00000576218 GALK1P51570 392 aa16■□□□□ 0.15
SMG6-220ENST00000576218 ZNF132P52740 706 aa16■□□□□ 0.15
SMG6-220ENST00000576218 COG7P83436 770 aa16■□□□□ 0.15
SMG6-220ENST00000576218 GAD2Q05329 585 aa16■□□□□ 0.15
SMG6-220ENST00000576218 PTK2Q05397 1052 aa16■□□□□ 0.15
SMG6-220ENST00000576218 TYRO3Q06418 890 aa16■□□□□ 0.15
SMG6-220ENST00000576218 DHCR24Q15392 516 aa16■□□□□ 0.15
SMG6-220ENST00000576218 TMEM196Q5HYL7 178 aa16■□□□□ 0.15
SMG6-220ENST00000576218 MIIPQ5JXC2 388 aa16■□□□□ 0.15
SMG6-220ENST00000576218 KLHDC10Q6PID8 442 aa16■□□□□ 0.15
SMG6-220ENST00000576218 Q6ZS52 159 aa16■□□□□ 0.15
SMG6-220ENST00000576218 BBS7Q8IWZ6 715 aa16■□□□□ 0.15
SMG6-220ENST00000576218 SYNPOQ8N3V7 929 aa16■□□□□ 0.15
SMG6-220ENST00000576218 SPEM1Q8N4L4 309 aa16■□□□□ 0.15
SMG6-220ENST00000576218 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
SMG6-220ENST00000576218 KCTD13Q8WZ19 329 aa16■□□□□ 0.15
SMG6-220ENST00000576218 NDRG1Q92597 394 aaKnown RBP16■□□□□ 0.15
SMG6-220ENST00000576218 CHFRQ96EP1 664 aa16■□□□□ 0.15
SMG6-220ENST00000576218 ZFRQ96KR1 1074 aaKnown RBP16■□□□□ 0.15
SMG6-220ENST00000576218 KLF16Q9BXK1 252 aaPredicted RBP16■□□□□ 0.15
SMG6-220ENST00000576218 MIS12Q9H081 205 aa16■□□□□ 0.15
SMG6-220ENST00000576218 VPS16Q9H269 839 aa16■□□□□ 0.15
SMG6-220ENST00000576218 FANCLQ9NW38 375 aa16■□□□□ 0.15
SMG6-220ENST00000576218 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
SMG6-220ENST00000576218 TMEM63CQ9P1W3 806 aa16■□□□□ 0.15
SMG6-220ENST00000576218 CACNA1HO95180 2353 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 SLC12A8A0AV02 714 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 ATG13O75143 517 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 FBXO21O94952 628 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 EGFP01133 1207 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 FZD5Q13467 585 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 CCINQ13939 588 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 FBXO43Q4G163 708 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 LY6G5CQ5SRR4 150 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 FSTL4Q6MZW2 842 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 PMF1Q6P1K2 205 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 TSSK4Q6SA08 328 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 ALYREFQ86V81 257 aaKnown RBP15.99■□□□□ 0.15
SMG6-220ENST00000576218 ADGRG2Q8IZP9 1017 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 EDEM1Q92611 657 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 HSFY1Q96LI6 401 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 CEP83Q9Y592 693 aa15.99■□□□□ 0.15
SMG6-220ENST00000576218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.98■□□□□ 0.15
SMG6-220ENST00000576218 SART1O43290 800 aaKnown RBP15.98■□□□□ 0.15
SMG6-220ENST00000576218 RNF40O75150 1001 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 KRT9P35527 623 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 ACADSBP45954 432 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 MRE11P49959 708 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 NRLP54845 237 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SEC13P55735 322 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 DAOAP59103 153 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 KDSRQ06136 332 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 KRT31Q15323 416 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 PREPLQ4J6C6 727 aaPredicted RBP15.98■□□□□ 0.15
SMG6-220ENST00000576218 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 PKDCCQ504Y2 493 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 CDKAL1Q5VV42 579 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 BSPRYQ5W0U4 402 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 NAIF1Q69YI7 327 aaPredicted RBP15.98■□□□□ 0.15
SMG6-220ENST00000576218 PM20D1Q6GTS8 502 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 DENND1BQ6P3S1 775 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 TPGS1Q6ZTW0 290 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 NUDT18Q6ZVK8 323 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 AOPEPQ8N6M6 819 aa15.98■□□□□ 0.15
SMG6-220ENST00000576218 SLC35F5Q8WV83 523 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms