RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C19orf57Q0VDD7 668 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 TRPC3Q13507 836 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 SF3A1Q15459 793 aaKnown RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 WDR72Q3MJ13 1102 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 SCARA3Q6AZY7 606 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 KIAA1324Q6UXG2 1013 aaKnown RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 MIB1Q86YT6 1006 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 TOE1Q96GM8 510 aaKnown RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 TNIP3Q96KP6 325 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 MRPL45Q9BRJ2 306 aaKnown RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 B3GNT5Q9BYG0 378 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 PCED1AQ9H1Q7 454 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 GAREM1Q9H706 876 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 DMAP1Q9NPF5 467 aaPredicted RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 ITM2CQ9NQX7 267 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 TM7SF3Q9NS93 570 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
SMG6-218ENST00000575454 IL37Q9NZH6 218 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
SMG6-218ENST00000575454 FAM92AA1XBS5 289 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 FRMD3A2A2Y4 597 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 TK2O00142 265 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 SYNCRIPO60506 623 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 TLR5O60602 858 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CILPO75339 1184 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 TRIM21P19474 475 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 MAOBP27338 520 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 GJB2P29033 226 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 SLC5A3P53794 718 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CACNA2D1P54289 1103 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 SNRPFP62306 86 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 GRIN1Q05586 938 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 HLA-BQ31612 363 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 DBX2Q6ZNG2 339 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CCDC65Q8IXS2 484 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 UCMAQ8WVF2 138 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 SMARCD1Q96GM5 515 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 UBL7Q96S82 380 aaPredicted RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 ACOX2Q99424 681 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 NUP58Q9BVL2 599 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 GPR174Q9BXC1 333 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CCSER2Q9H7U1 834 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 TLR8Q9NR97 1041 aaKnown RBP9.52□□□□□ -0.89
SMG6-218ENST00000575454 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 CACNA2D2Q9NY47 1150 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 HSPBP1Q9NZL4 362 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 ZNF510Q9Y2H8 683 aa9.52□□□□□ -0.89
SMG6-218ENST00000575454 SPAG17Q6Q759 2223 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TRABD2BA6NFA1 517 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 PRRT4C9JH25 899 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 CLDN5O00501 218 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TRIM24O15164 1050 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TNFSF14O43557 240 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 DKK1O94907 266 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 CST3P01034 146 aaPredicted RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 DLATP10515 647 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 IRF1P10914 325 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 ACADMP11310 421 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 CDK4P11802 303 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 ATP5C1P36542 298 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 GRK6P43250 576 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 AFF3P51826 1226 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 CASP5P51878 434 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 CYP4F3Q08477 520 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 PSMD6Q15008 389 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 RABEP1Q15276 862 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 SNRNP35Q16560 246 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 INAVAQ3KP66 663 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 LARP1BQ659C4 914 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 KLHDC10Q6PID8 442 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TPGS1Q6ZTW0 290 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TADA2BQ86TJ2 420 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 LSM14AQ8ND56 463 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 SCAMP5Q8TAC9 235 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 BAHD1Q8TBE0 780 aaPredicted RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 PRCCQ92733 491 aaPredicted RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 SIPA1Q96FS4 1042 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 KCNK16Q96T55 309 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 DPEP3Q9H4B8 488 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 TMEM30AQ9NV96 361 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 GMIPQ9P107 970 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 USP36Q9P275 1121 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
SMG6-218ENST00000575454 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 SLC27A6Q9Y2P4 619 aa9.51□□□□□ -0.89
SMG6-218ENST00000575454 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms