RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GALNT4Q8N4A0 578 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 CCDC33Q8N5R6 958 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 FNDC8Q8TC99 324 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 TFB1MQ8WVM0 346 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 TRIM56Q9BRZ2 755 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 Q9H521 79 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 SMYD2Q9NRG4 433 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 THAP1Q9NVV9 213 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 PAIP2BQ9ULR5 123 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 EXOC7Q9UPT5 735 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 TTLL3Q9Y4R7 772 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 CEPT1Q9Y6K0 416 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 AK5Q9Y6K8 562 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 CDH2P19022 906 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 YWHABP31946 246 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 MSX2P35548 267 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 STT3AP46977 705 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 MTA1Q13330 715 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 AOC3Q16853 763 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 PHTF2Q8N3S3 785 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 PIWIL2Q8TC59 973 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 GJD4Q96KN9 370 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 APOBEC3GQ9HC16 384 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 ITGA11Q9UKX5 1188 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 FAF1Q9UNN5 650 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 GNEQ9Y223 722 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 C1QAP02745 245 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 MMP8P22894 467 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 NPTX2P47972 431 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 RPL10AP62906 217 aaKnown RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 SPP2Q13103 211 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 LRRC38Q5VT99 294 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 TRIM72Q6ZMU5 477 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 MAVSQ7Z434 540 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 TMIGD2Q96BF3 282 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 PNPOQ9NVS9 261 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 SORCS3Q9UPU3 1222 aa14.93□□□□□ -0.02
SMG6-215ENST00000574501 GREB1LQ9C091 1923 aaPredicted RBP14.93□□□□□ -0.02
SMG6-215ENST00000574501 VIL1P09327 827 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 RBP3P10745 1247 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ITGB5P18084 799 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 KCNA4P22459 653 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 IL1R2P27930 398 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 PTPN7P35236 360 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 SNRPFP62306 86 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 CDKL1Q00532 357 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CYTH1Q15438 398 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 UGCGQ16739 394 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 FASTKD1Q53R41 847 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 TDRD10Q5VZ19 366 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 TATDN1Q6P1N9 297 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ATG14Q6ZNE5 492 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 USP37Q86T82 979 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 MAP4K3Q8IVH8 894 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 AHI1Q8N157 1196 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 PPP1R14BQ96C90 147 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 LRGUKQ96M69 825 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CDCA7Q9BWT1 371 aaPredicted RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 ST6GALNAC4Q9H4F1 302 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ZNF696Q9H7X3 374 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 COPS7BQ9H9Q2 264 aaPredicted RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 INIPQ9NRY2 104 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 DDX56Q9NY93 547 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 TUBGCP4Q9UGJ1 667 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 PSMD13Q9UNM6 376 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 SSX2IPQ9Y2D8 614 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ZNF536O15090 1300 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 ZC3H11AO75152 810 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMG6-215ENST00000574501 FAM58BPP0C7Q3 252 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CSH1P0DML2 217 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CSH2P0DML3 217 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CD1EP15812 388 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 TSHRP16473 764 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 L1CAMP32004 1257 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 JAG1P78504 1218 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 MRPS22P82650 360 aaKnown RBP14.92□□□□□ -0.02
SMG6-215ENST00000574501 CDK18Q07002 472 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 CUL2Q13617 745 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 FAXCQ5TGI0 409 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 PDPK2PQ6A1A2 396 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 SCARA3Q6AZY7 606 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 GPD1LQ8N335 351 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 GMCL1Q96IK5 515 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 FBXL18Q96ME1 805 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 PCDH18Q9HCL0 1135 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 HOMER2Q9NSB8 354 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 RAB26Q9ULW5 256 aa14.92□□□□□ -0.02
SMG6-215ENST00000574501 HNRNPDLO14979 420 aaKnown RBP14.91□□□□□ -0.02
SMG6-215ENST00000574501 DCXO43602 365 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 FBXO21O94952 628 aa14.91□□□□□ -0.02
SMG6-215ENST00000574501 ATP5BP06576 529 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms