RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MMEP08473 750 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 CFHP08603 1231 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 PBX1P40424 430 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 COG7P83436 770 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 USP4Q13107 963 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 ZNF77Q15935 545 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 ASIC2Q16515 512 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 BSPRYQ5W0U4 402 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 PPP1R2P3Q6NXS1 205 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 SCD5Q86SK9 330 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 ZDHHC17Q8IUH5 632 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 DDX1Q92499 740 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 BAP1Q92560 729 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 KHSRPQ92945 711 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 FAM149B1Q96BN6 582 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 SMPD4Q9NXE4 827 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 TBC1D14Q9P2M4 693 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 NOCTQ9UK39 431 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 LSM7Q9UK45 103 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 TICRRQ7Z2Z1 1910 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 KIF26AQ9ULI4 1882 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 YJEFN3A6XGL0 299 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 E7ENQ6 273 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 CAPN9O14815 690 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 GLI1P08151 1106 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 IFNAR2P48551 515 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 KPNA1P52294 538 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 ZBED6P86452 979 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 AMPD2Q01433 879 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 PRKCQQ04759 706 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 EFEMP1Q12805 493 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 NR1H3Q13133 447 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 PDGFRLQ15198 375 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 EFHC1Q5JVL4 640 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 SPECC1LQ69YQ0 1117 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 C1orf228Q6PIY5 440 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 OSCP1Q8WVF1 389 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 ATP2A3Q93084 1043 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 C18orf8Q96DM3 657 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 RSPRY1Q96DX4 576 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 CPXM1Q96SM3 734 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 TTYH3Q9C0H2 523 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 EPHX3Q9H6B9 360 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 CFAP97Q9P2B7 532 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 RASAL2Q9UJF2 1139 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 CAPN11Q9UMQ6 739 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 ZNF510Q9Y2H8 683 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
TRAPPC1-206ENST00000573989 E2F8A0AVK6 867 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 TMEM221A6NGB7 291 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 M0R296 226 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 TBX18O95935 607 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 NCAM1P13591 858 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 GLULP15104 373 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 TNFAIP3P21580 790 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 PGFP49763 221 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 MLLT6P55198 1093 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 YWHAZP63104 245 aaKnown RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 FMO1Q01740 532 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 KLHL30Q0D2K2 578 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 OR6B2Q6IFH4 312 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 BEND5Q7L4P6 421 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 VPS36Q86VN1 386 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 MIB1Q86YT6 1006 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 SIX5Q8N196 739 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 CPA6Q8N4T0 437 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 SLC20A1Q8WUM9 679 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 NDRG1Q92597 394 aaKnown RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 EXOC4Q96A65 974 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 OTUB2Q96DC9 234 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 MSANTD3Q96H12 275 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 AGPAT1Q99943 283 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 KLF16Q9BXK1 252 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 DCLK3Q9C098 648 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 C8orf33Q9H7E9 229 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 ASNSD1Q9NWL6 643 aa13.36□□□□□ -0.27
TRAPPC1-206ENST00000573989 MARCH2Q9P0N8 246 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms