RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZXDBP98169 803 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 PDCLQ13371 301 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 ZNF268Q14587 947 aaPredicted RBP16.61■□□□□ 0.25
CHD3-215ENST00000572750 ZNF77Q15935 545 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 MEA1Q16626 185 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 BHLHA9Q7RTU4 235 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
CHD3-215ENST00000572750 SIX5Q8N196 739 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 EPS8L1Q8TE68 723 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 SH3RF2Q8TEC5 729 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 CLEC4CQ8WTT0 213 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
CHD3-215ENST00000572750 NACA2Q9H009 215 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 ST7Q9NRC1 585 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 OBP2AQ9NY56 170 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 NUDT5Q9UKK9 219 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 DAAM1Q9Y4D1 1078 aa16.61■□□□□ 0.25
CHD3-215ENST00000572750 MDM4O15151 490 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 TBX18O95935 607 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 RARGP13631 454 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD3-215ENST00000572750 SLC7A9P82251 487 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 MTF1Q14872 753 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 NR1I3Q14994 352 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 SMYD5Q6GMV2 418 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 C1orf131Q8NDD1 294 aaKnown RBP16.6■□□□□ 0.25
CHD3-215ENST00000572750 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 ZFRQ96KR1 1074 aaKnown RBP16.6■□□□□ 0.25
CHD3-215ENST00000572750 CYLDQ9NQC7 956 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 ARHGEF3Q9NR81 526 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD3-215ENST00000572750 IFNKQ9P0W0 207 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 PCDHGC3Q9UN70 934 aa16.6■□□□□ 0.25
CHD3-215ENST00000572750 MAP1BP46821 2468 aaKnown RBP16.6■□□□□ 0.25
CHD3-215ENST00000572750 A0A1W2PQC6 194 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 KRBA1A5PL33 1030 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 YJEFN3A6XGL0 299 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 E7ENQ6 273 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 LEFTY2O00292 366 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 ARNTLO00327 626 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 ZNF263O14978 683 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 IRF1P10914 325 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 KRT9P35527 623 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 UBASH3AP57075 661 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 DAOAP59103 153 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 BPIFB4P59827 614 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 ARID5AQ03989 594 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 C10orf120Q5SQS8 335 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 TRIM68Q6AZZ1 485 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 PM20D1Q6GTS8 502 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 CACNA2D4Q7Z3S7 1137 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 DDX1Q92499 740 aaKnown RBP16.59■□□□□ 0.25
CHD3-215ENST00000572750 MIS12Q9H081 205 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 CNGB3Q9NQW8 809 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 CFAP97Q9P2B7 532 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 TJP2Q9UDY2 1190 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
CHD3-215ENST00000572750 SPTBN2O15020 2390 aa16.58■□□□□ 0.25
CHD3-215ENST00000572750 E5RJQ4 531 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 CHADO15335 359 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 MMEP08473 750 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 STAT1P42224 750 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 PSEN1P49768 467 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 PFKPQ01813 784 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 TNK2Q07912 1038 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 ARHGAP18Q8N392 663 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 WDTC1Q8N5D0 677 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 DNASE1L2Q92874 299 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 IRF7Q92985 503 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 SLC4A5Q9BY07 1137 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 HEBP1Q9NRV9 189 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 CLIC5Q9NZA1 410 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 WNT16Q9UBV4 365 aa16.58■□□□□ 0.24
CHD3-215ENST00000572750 NOCTQ9UK39 431 aaKnown RBP16.58■□□□□ 0.24
CHD3-215ENST00000572750 RALAP11233 206 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 PBX1P40424 430 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 MLF2Q15773 248 aaPredicted RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 RSRC2Q7L4I2 434 aaKnown RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 DGLUCYQ7Z3D6 616 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 MIB1Q86YT6 1006 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 SCUBE3Q8IX30 993 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 BAP1Q92560 729 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 EDEM1Q92611 657 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 WBP2Q969T9 261 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 PIWIL1Q96J94 861 aaKnown RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 XPO4Q9C0E2 1151 aaKnown RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 TTYH3Q9C0H2 523 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 GKN1Q9NS71 199 aa16.57■□□□□ 0.24
CHD3-215ENST00000572750 THG1LQ9NWX6 298 aaKnown RBP16.57■□□□□ 0.24
CHD3-215ENST00000572750 GTSE1Q9NYZ3 720 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms