RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 ZNF292O60281 2723 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 HELZP42694 1942 aaKnown RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 TMEM189-UBE2V1I3L0A0 370 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GABRDO14764 452 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 TM4SF5O14894 197 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 VNN2O95498 520 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 PRAMEF12O95522 483 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 DLGAP3O95886 979 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 NFICP08651 508 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 MCF2P10911 925 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 NMT1P30419 496 aaKnown RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 NTF4P34130 210 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GPR15P49685 360 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 LIG4P49917 911 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 TOB1P50616 345 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ETF1P62495 437 aaKnown RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 YWHAHQ04917 246 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 DUSP4Q13115 394 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 SIM2Q14190 667 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 PUM1Q14671 1186 aaKnown RBP eCLIP6.78□□□□□ -1.327e-6■□□□□ 10.1
PRPF8-204ENST00000572445 DHCR24Q15392 516 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 IL17AQ16552 155 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 MGAT5BQ3V5L5 792 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 SLC39A12Q504Y0 691 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GPR158Q5T848 1215 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 NAIF1Q69YI7 327 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 RINT1Q6NUQ1 792 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GPBP1Q86WP2 473 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 PHACTR4Q8IZ21 702 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ATAD1Q8NBU5 361 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ZNF461Q8TAF7 563 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 NUDT8Q8WV74 236 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 SMARCD2Q92925 531 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 DDX23Q9BUQ8 820 aaKnown RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 RAB34Q9BZG1 259 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 HAPLN2Q9GZV7 340 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 FOXP1Q9H334 677 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ATXN3LQ9H3M9 355 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 TRPC7Q9HCX4 862 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 CRTAC1Q9NQ79 661 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 AASDHPPTQ9NRN7 309 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GTSE1Q9NYZ3 720 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 GDE1Q9NZC3 331 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ARHGAP28Q9P2N2 729 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 RALYQ9UKM9 306 aaKnown RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 MAGED2Q9UNF1 606 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 LIMCH1Q9UPQ0 1083 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 PCDHGA2Q9Y5H1 932 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 BACE2Q9Y5Z0 518 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 ZFP37Q9Y6Q3 630 aaPredicted RBP6.78□□□□□ -1.32
PRPF8-204ENST00000572445 THADAQ6YHU6 1953 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 KIAA1549LQ6ZVL6 1849 aa6.78□□□□□ -1.32
PRPF8-204ENST00000572445 DNAH14Q0VDD8 3507 aa6.77□□□□□ -1.32
PRPF8-204ENST00000572445 ARHGEF37A1IGU5 675 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 MTMR11A4FU01 709 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 SHISA7A6NL88 538 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 LACTBL1A8MY62 500 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 H3BQV1 296 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 NEMP1O14524 444 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 ABLIM1O14639 778 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 RGS13O14921 159 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 SYN3O14994 580 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 NCAM2O15394 837 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 EPB41L2O43491 1005 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 TBCAO75347 108 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 MOSPD3O75425 235 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 PLA2G4BP0C869 781 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 BMP4P12644 408 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 ATF2P15336 505 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 CPEP16870 476 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 PSMC3P17980 439 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 GABRR2P28476 465 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 ATXN1P54253 815 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 EPHB3P54753 998 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 SF3A2Q15428 464 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 SF1Q15637 639 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 TAF12Q16514 161 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 NKG7Q16617 165 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 CCDC142Q17RM4 750 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 BBS9Q3SYG4 887 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 AASDHQ4L235 1098 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 RNF219Q5W0B1 726 aaPredicted RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 TRIM68Q6AZZ1 485 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 SLC8B1Q6J4K2 584 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 TTC30AQ86WT1 665 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 MCATQ8IVS2 390 aaKnown RBP6.77□□□□□ -1.33
PRPF8-204ENST00000572445 MYCT1Q8N699 235 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 APPL2Q8NEU8 664 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 FBXO18Q8NFZ0 1043 aa6.77□□□□□ -1.33
PRPF8-204ENST00000572445 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms