RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 PFKFB2O60825 505 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 CTDNEP1O95476 244 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 PIGRP01833 764 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 ZNF132P52740 706 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 TAF10Q12962 218 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 DNAJC3Q13217 504 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 MAPRE1Q15691 268 aaKnown RBP13.89□□□□□ -0.19
CCDC40-208ENST00000572270 TDRD10Q5VZ19 366 aaKnown RBP13.89□□□□□ -0.19
CCDC40-208ENST00000572270 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 MYLPFQ96A32 169 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 MKRN2Q9H000 416 aaKnown RBP13.89□□□□□ -0.19
CCDC40-208ENST00000572270 TM9SF3Q9HD45 589 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 STON1Q9Y6Q2 735 aa13.89□□□□□ -0.19
CCDC40-208ENST00000572270 USP9XQ93008 2570 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 TEX15Q9BXT5 2789 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 K7ENM7 598 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 CBX4O00257 560 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 CACNG3O60359 315 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 SCP2P22307 547 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 GLDCP23378 1020 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 DGKGP49619 791 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 ACADVLP49748 655 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 NOP14P78316 857 aaKnown RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 FAM171BQ6P995 826 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 LAYNQ6UX15 382 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 FAM124AQ86V42 546 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 TMPRSS6Q8IU80 811 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 DUSP9Q99956 384 aaKnown RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 SYT15Q9BQS2 421 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 BBS2Q9BXC9 721 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 OSGEPQ9NPF4 335 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 AGAP1Q9UPQ3 857 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 CLCA2Q9UQC9 943 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 SNX9Q9Y5X1 595 aa13.88□□□□□ -0.19
CCDC40-208ENST00000572270 UBR5O95071 2799 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-208ENST00000572270 HCRTO43612 131 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 REC8O95072 547 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 IL18RAPO95256 599 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 IGLV3-19P01714 112 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ITGB3P05106 788 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ITGAVP06756 1048 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 IRF1P10914 325 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 FDPSP14324 419 aaKnown RBP13.87□□□□□ -0.19
CCDC40-208ENST00000572270 TYRP14679 529 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ABCB4P21439 1286 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 CTSKP43235 329 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 C21orf59P57076 290 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 PSMC1P62191 440 aaKnown RBP13.87□□□□□ -0.19
CCDC40-208ENST00000572270 C6orf132Q5T0Z8 1188 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ZNF574Q6ZN55 896 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-208ENST00000572270 CACUL1Q86Y37 369 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 GATAD2AQ86YP4 633 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 DHX40Q8IX18 779 aaKnown RBP13.87□□□□□ -0.19
CCDC40-208ENST00000572270 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 KCNE4Q8WWG9 221 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ZNF578Q96N58 590 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-208ENST00000572270 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 KCND2Q9NZV8 630 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 WDR35Q9P2L0 1181 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 ANKMY1Q9P2S6 941 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 SLCO1B1Q9Y6L6 691 aa13.87□□□□□ -0.19
CCDC40-208ENST00000572270 MYH10P35580 1976 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 A0A1B0GTQ1 180 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 F8VP50 259 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 NPC1O15118 1278 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 COCHO43405 550 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 ATP2C2O75185 946 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 KRT10P13645 584 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
CCDC40-208ENST00000572270 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 ILKQ13418 452 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
CCDC40-208ENST00000572270 TTC38Q5R3I4 469 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 KCNK18Q7Z418 384 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 LRRC52Q8N7C0 313 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 KCNN1Q92952 543 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 NACA2Q9H009 215 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 C6orf106Q9H6K1 298 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-208ENST00000572270 AGO2Q9UKV8 859 aaKnown RBP13.86□□□□□ -0.19
CCDC40-208ENST00000572270 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
CCDC40-208ENST00000572270 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-208ENST00000572270 DOPEY2Q9Y3R5 2298 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 KNL1Q8NG31 2342 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 GABRDO14764 452 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 KLK10O43240 276 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 CDH8P55286 799 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
CCDC40-208ENST00000572270 HECTD3Q5T447 861 aa13.85□□□□□ -0.19
CCDC40-208ENST00000572270 SLC39A4Q6P5W5 647 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms