RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 GOLGA8DPQ0D2H9 430 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 MESP2Q0VG99 397 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 BST2Q10589 180 aaKnown RBP18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 EFEMP1Q12805 493 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 FBXO43Q4G163 708 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 C2orf27AQ580R0 203 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 TMEM25Q86YD3 366 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 KREMEN1Q96MU8 473 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 HHIPQ96QV1 700 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 ZSWIM1Q9BR11 485 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 UBXN6Q9BZV1 441 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 LMBRD1Q9NUN5 540 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 ANAPC1Q9H1A4 1944 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 GREM1O60565 184 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 PAPSS2O95340 614 aaPredicted RBP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 ZBED1O96006 694 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 PAEPP09466 180 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 KRT5P13647 590 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 LCP1P13796 627 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 MTIF2P46199 727 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 PLA2G4AP47712 749 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 PSEN1P49768 467 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 RGS7P49802 495 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 YWHAGP61981 247 aaKnown RBP eCLIP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 GAD2Q05329 585 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 ADIGQ0VDE8 80 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 HSP90AA4PQ58FG1 418 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 RAB41Q5JT25 222 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 TPGS1Q6ZTW0 290 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 RSRC2Q7L4I2 434 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 TADA2BQ86TJ2 420 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 LONP2Q86WA8 852 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 OTUB2Q96DC9 234 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 IPO9Q96P70 1041 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 PNKPQ96T60 521 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 EPC1Q9H2F5 836 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 LSM7Q9UK45 103 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 KIAA1257Q9ULG3 409 aa18.68■□□□□ 0.58
CTDNEP1-207ENST00000572043 K7EQS6 105 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 M0QYV0 167 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 HRO43593 1189 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 APBA1Q02410 837 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 GCNT1Q02742 428 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 BTBD8Q5XKL5 378 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 LCLAT1Q6UWP7 414 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 HTR3DQ70Z44 454 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 IRF2BP1Q8IU81 584 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 SIX6OS1Q8N1H7 587 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 ARHGAP18Q8N392 663 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 RUBCNQ92622 972 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 SECISBP2LQ93073 1101 aaKnown RBP18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 UBE2TQ9NPD8 197 aaPredicted RBP18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 ZDHHC4Q9NPG8 344 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 ARHGEF4Q9NR80 690 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 SPHK2Q9NRA0 654 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 CLIC5Q9NZA1 410 aa18.67■□□□□ 0.58
CTDNEP1-207ENST00000572043 NEDD8-MDP1E9PL57 170 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 KAT7O95251 611 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 APODP05090 189 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 SETSIPP0DME0 302 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 SLC9A1P19634 815 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 SIM2Q14190 667 aaPredicted RBP18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 DMC1Q14565 340 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 KLHDC10Q6PID8 442 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 KIAA2013Q8IYS2 634 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 EDEM1Q92611 657 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 BHMTQ93088 406 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 RAB23Q9ULC3 237 aa18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 ZNF638Q14966 1978 aaKnown RBP18.66■□□□□ 0.58
CTDNEP1-207ENST00000572043 SLC12A8A0AV02 714 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 TRIM24O15164 1050 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 STC2O76061 302 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 TIE1P35590 1138 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 CNGA2Q16280 664 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 PKDCCQ504Y2 493 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 PMF1Q6P1K2 205 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 BHLHA9Q7RTU4 235 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 USP33Q8TEY7 942 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 ACDQ96AP0 544 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 GBP4Q96PP9 640 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 CDK5RAP1Q96SZ6 601 aaKnown RBP18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 BBS2Q9BXC9 721 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 MARCH2Q9P0N8 246 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 STRIP2Q9ULQ0 834 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 CACNA1HO95180 2353 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 F5P12259 2224 aa18.65■□□□□ 0.58
CTDNEP1-207ENST00000572043 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 TBC1D3BA6NDS4 549 aa18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 YJEFN3A6XGL0 299 aa18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 E7ENQ6 273 aa18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 HOXC11O43248 304 aaPredicted RBP18.64■□□□□ 0.57
CTDNEP1-207ENST00000572043 TULP3O75386 442 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms