RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 BCAT2O15382 392 aaPredicted RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 COCHO43405 550 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 CACNG3O60359 315 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 PPP1R37O75864 691 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 ATXN1LP0C7T5 689 aaKnown RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 NCAM1P13591 858 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 GAP43P17677 238 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 OXTRP30559 389 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 DDIT3P35638 169 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 ZNF132P52740 706 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 IFRD2Q12894 506 aaPredicted RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 SURF1Q15526 300 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 DUOXA2Q1HG44 320 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 HLA-BQ31612 363 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 DBX2Q6ZNG2 339 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 STRA6Q9BX79 667 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 GPR174Q9BXC1 333 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 BBS2Q9BXC9 721 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.482e-8■■■■■ 385.8
CHMP6-202ENST00000571457 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 TOR4AQ9NXH8 423 aa12.03□□□□□ -0.48
CHMP6-202ENST00000571457 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
CHMP6-202ENST00000571457 GOLGA8IPA6NC78 632 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 GOLGA8JA6NMD2 632 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 NEDD8-MDP1E9PL57 170 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 KIAA0391O15091 583 aaKnown RBP12.02□□□□□ -0.49
CHMP6-202ENST00000571457 NPC1O15118 1278 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 TRIM24O15164 1050 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ATXN7O15265 892 aaPredicted RBP12.02□□□□□ -0.49
CHMP6-202ENST00000571457 TACC1O75410 805 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 BMP15O95972 392 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 TYRP14679 529 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 PTPN1P18031 435 aaKnown RBP12.02□□□□□ -0.49
CHMP6-202ENST00000571457 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ALCAMQ13740 583 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 E2F5Q15329 346 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 SNX30Q5VWJ9 437 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 SCARA3Q6AZY7 606 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ZSWIM2Q8NEG5 633 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 SLC6A17Q9H1V8 727 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 IL21RQ9HBE5 538 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ITM2CQ9NQX7 267 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 WSB2Q9NYS7 404 aaPredicted RBP12.02□□□□□ -0.49
CHMP6-202ENST00000571457 MARK1Q9P0L2 795 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 CHORDC1Q9UHD1 332 aaPredicted RBP12.02□□□□□ -0.49
CHMP6-202ENST00000571457 RAD54BQ9Y620 910 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ATP8B3O60423 1300 aa12.02□□□□□ -0.49
CHMP6-202ENST00000571457 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GOLGA8CPA6NN73 597 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 METTL12A8MUP2 240 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 TNFSF14O43557 240 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 PRPF6O94906 941 aaKnown RBP12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GCNT3O95395 438 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 PRB1P04280 392 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 HLA-EP13747 358 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GRK6P43250 576 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 DGKGP49619 791 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 AFF3P51826 1226 aaKnown RBP12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GOLGA8FQ08AF8 430 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 KCNA1Q09470 495 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GOLGA8DPQ0D2H9 430 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 SMAD1Q15797 465 aaKnown RBP12.01□□□□□ -0.49
CHMP6-202ENST00000571457 DCAF12L1Q5VU92 463 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 LRRC69Q6ZNQ3 347 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 HTR3DQ70Z44 454 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 DYMQ7RTS9 669 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 GPD1LQ8N335 351 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 OR6B3Q8NGW1 331 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 PIP4K2CQ8TBX8 421 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 ERLEC1Q96DZ1 483 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 FAM84AQ96KN4 292 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 NUP58Q9BVL2 599 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 ZNF518BQ9C0D4 1074 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 PCED1AQ9H1Q7 454 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 CCSER2Q9H7U1 834 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 CD93Q9NPY3 652 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 COMMD8Q9NX08 183 aa12.01□□□□□ -0.49
CHMP6-202ENST00000571457 USP36Q9P275 1121 aaKnown RBP12.01□□□□□ -0.49
CHMP6-202ENST00000571457 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
CHMP6-202ENST00000571457 CAPN8A6NHC0 703 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 A8MXQ7 604 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 PRRT4C9JH25 899 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 H3BQV1 296 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 IRF1P10914 325 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 CACNA2D1P54289 1103 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 TNNC1P63316 161 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 FUT11Q495W5 492 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 TMPRSS12Q86WS5 348 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 WDR49Q8IV35 697 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 OR5B17Q8NGF7 314 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 NXPE2Q96DL1 559 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms