RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HEBP1Q9NRV9 189 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 OBP2AQ9NY56 170 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 GTSE1Q9NYZ3 720 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 NAGPAQ9UK23 515 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 MTF2Q9Y483 593 aaPredicted RBP7.34□□□□□ -1.23
SMG6-209ENST00000571442 WNT6Q9Y6F9 365 aa7.34□□□□□ -1.23
SMG6-209ENST00000571442 ATG2BQ96BY7 2078 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 A0A1W2PQC6 194 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 LRRC53A6NM62 1247 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SOBPA7XYQ1 873 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 GOLGA6L19H0YKK7 550 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 DPYSL4O14531 572 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 CHADO15335 359 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 MSI1O43347 362 aaKnown RBP7.33□□□□□ -1.24
SMG6-209ENST00000571442 MED7O43513 233 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 PI15O43692 258 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 KLKB1P03952 638 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 IRF1P10914 325 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 TCF3P15923 654 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 TRIM21P19474 475 aaKnown RBP7.33□□□□□ -1.24
SMG6-209ENST00000571442 RFX1P22670 979 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 PPP3CCP48454 512 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 TUBP50607 506 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 VCPP55072 806 aaKnown RBP7.33□□□□□ -1.24
SMG6-209ENST00000571442 NOMO3P69849 1222 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 NHLH1Q02575 133 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ARID5AQ03989 594 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 EFEMP1Q12805 493 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 MEA1Q16626 185 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 EML3Q32P44 896 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SLC44A4Q53GD3 710 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SYPL2Q5VXT5 272 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 BSPRYQ5W0U4 402 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 TRNP1Q6NT89 227 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 FAM183BPQ6ZVS7 135 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 TMEM110Q86TL2 294 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 BBS7Q8IWZ6 715 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 UBALD2Q8IYN6 164 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SIX5Q8N196 739 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ZNF687Q8N1G0 1237 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SCML4Q8N228 414 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 PDZD8Q8NEN9 1154 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 DEPDC1BQ8WUY9 529 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 CPA5Q8WXQ8 436 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ADAM33Q9BZ11 813 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 FOXQ1Q9C009 403 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 KCNH6Q9H252 994 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 LHX5Q9H2C1 402 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 EBF3Q9H4W6 596 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 BRD9Q9H8M2 597 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 CNGB3Q9NQW8 809 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ARHGEF3Q9NR81 526 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 EHD2Q9NZN4 543 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 CALCOCO1Q9P1Z2 691 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 CFAP97Q9P2B7 532 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 WNT16Q9UBV4 365 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 SFMBT1Q9UHJ3 866 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 NAALADL1Q9UQQ1 740 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 F5P12259 2224 aa7.33□□□□□ -1.24
SMG6-209ENST00000571442 ZNF263O14978 683 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 GRAP2O75791 330 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 STC2O76061 302 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 GJB6O95452 261 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 CAVIN2O95810 425 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 LTFP02788 710 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 CYP1A1P04798 512 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 GYPCP04921 128 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 HMBSP08397 361 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 SKILP12757 684 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 UNGP13051 313 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 GLULP15104 373 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 PFKLP17858 780 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 HOXC13P31276 330 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 STAT1P42224 750 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 MRE11P49959 708 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 PDE6CP51160 858 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 CDR2Q01850 454 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 MESP2Q0VG99 397 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 PTP4A2Q12974 167 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 FZD5Q13467 585 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 MLF2Q15773 248 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 FILIP1LQ4L180 1135 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 C10orf120Q5SQS8 335 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 OTUD1Q5VV17 481 aaPredicted RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 NAA35Q5VZE5 725 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 OLFML1Q6UWY5 402 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 Q6ZNB5 142 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 TPRG1Q6ZUI0 275 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 PHLDB2Q86SQ0 1253 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 C12orf40Q86WS4 652 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 MIB1Q86YT6 1006 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 SFTPA1Q8IWL2 248 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 SUGP1Q8IWZ8 645 aaKnown RBP7.32□□□□□ -1.24
SMG6-209ENST00000571442 SIX6OS1Q8N1H7 587 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 ZNF276Q8N554 614 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 TMEM105Q8N8V8 129 aa7.32□□□□□ -1.24
SMG6-209ENST00000571442 SLC30A5Q8TAD4 765 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms