RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 EML5Q05BV3 1969 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 A0A1W2PQF6 199 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 CYP26A1O43174 497 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 PRR29P0C7W0 189 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 GABRG2P18507 467 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 ADORA2BP29275 332 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 C10orf76Q5T2E6 689 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 SH3PXD2AQ5TCZ1 1133 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 LPCAT2Q7L5N7 544 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 ACOX2Q99424 681 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 TMEM9BQ9NQ34 198 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 TLR8Q9NR97 1041 aaKnown RBP18.54■□□□□ 0.56
CIITA-206ENST00000571190 BCCIPQ9P287 314 aaKnown RBP eCLIP18.54■□□□□ 0.56
CIITA-206ENST00000571190 CIZ1Q9ULV3 898 aaPredicted RBP18.54■□□□□ 0.56
CIITA-206ENST00000571190 SCML2Q9UQR0 700 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 STARD13Q9Y3M8 1113 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 PTPRDP23468 1912 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 ATG2BQ96BY7 2078 aa18.54■□□□□ 0.56
CIITA-206ENST00000571190 MDM4O15151 490 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 FAM200BP0CF97 657 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 PIK3CAP42336 1068 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 WASP42768 502 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 VAMP7P51809 220 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 PPP3CAQ08209 521 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 TRIM61Q5EBN2 209 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 EGFLAMQ63HQ2 1017 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 CYFIP2Q96F07 1278 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 SPACA7Q96KW9 195 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 NACA2Q9H009 215 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 NUDT5Q9UKK9 219 aa18.53■□□□□ 0.56
CIITA-206ENST00000571190 KIAA1549LQ6ZVL6 1849 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 A0A1W2PQH9 124 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 PRRT4C9JH25 899 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 MAPK13O15264 365 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 MAP3K13O43283 966 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 CACNG3O60359 315 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 TRIM49P0CI25 452 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 TRIM49CP0CI26 452 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 CSRP1P21291 193 aaKnown RBP18.52■□□□□ 0.56
CIITA-206ENST00000571190 ACO1P21399 889 aaKnown RBP18.52■□□□□ 0.56
CIITA-206ENST00000571190 NTSR1P30989 418 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 ATP5C1P36542 298 aaKnown RBP18.52■□□□□ 0.56
CIITA-206ENST00000571190 GCLMP48507 274 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 NFIL3Q16649 462 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 SPDYCQ5MJ68 293 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 PEAR1Q5VY43 1037 aaPredicted RBP18.52■□□□□ 0.56
CIITA-206ENST00000571190 TPGS1Q6ZTW0 290 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 TOGARAM2Q6ZUX3 1019 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 SCD5Q86SK9 330 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 PGBD3Q8N328 593 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 JAKMIP2Q96AA8 810 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 DNAJC17Q9NVM6 304 aaKnown RBP18.52■□□□□ 0.56
CIITA-206ENST00000571190 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.52■□□□□ 0.56
CIITA-206ENST00000571190 MARK1Q9P0L2 795 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 USP25Q9UHP3 1055 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 PILRBQ9UKJ0 227 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 FRMD4BQ9Y2L6 1034 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 CACNA1BQ00975 2339 aa18.52■□□□□ 0.56
CIITA-206ENST00000571190 ATXN2Q99700 1313 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 FAM237AA0A1B0GTK4 181 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 NEDD8-MDP1E9PL57 170 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 CALUO43852 315 aaPredicted RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 CILPO75339 1184 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 RHOBTB3O94955 611 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 MYL1P05976 194 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 HSP90AA1P07900 732 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 CISD3P0C7P0 127 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 TYRP14679 529 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 ITPKAP23677 461 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 KIF11P52732 1056 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 MCCD1P59942 119 aaPredicted RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 ZNF252P-AS1Q0IIN9 211 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 PREPLQ4J6C6 727 aaPredicted RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 GRAMD4Q6IC98 578 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 KLHDC10Q6PID8 442 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 Q6ZNB5 142 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 TRMT11Q7Z4G4 463 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 DEFB119Q8N690 84 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 BBS2Q9BXC9 721 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 NT5C1AQ9BXI3 368 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 CYP3A43Q9HB55 503 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 PNPLA8Q9NP80 782 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 CALCOCO1Q9P1Z2 691 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 MAPK8IP1Q9UQF2 711 aa18.51■□□□□ 0.55
CIITA-206ENST00000571190 ZNF638Q14966 1978 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 HELZP42694 1942 aaKnown RBP18.51■□□□□ 0.55
CIITA-206ENST00000571190 RARGP13631 454 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 CEACAM1P13688 526 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 HOXB2P14652 356 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 ENGP17813 658 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 NR2F2P24468 414 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 NDUFA8P51970 172 aa18.5■□□□□ 0.55
CIITA-206ENST00000571190 DPYDQ12882 1025 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms