RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 RAB20Q9NX57 234 aa21.8■■□□□ 1.08
LITAF-205ENST00000570904 NUDT5Q9UKK9 219 aa21.8■■□□□ 1.08
LITAF-205ENST00000570904 PCDHA5Q9Y5H7 936 aa21.8■■□□□ 1.08
LITAF-205ENST00000570904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 HOXC11O43248 304 aaPredicted RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 GREM1O60565 184 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 ATP5C1P36542 298 aaKnown RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 KIF11P52732 1056 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 PMS1P54277 932 aaKnown RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 CRY1Q16526 586 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 ANO4Q32M45 955 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 CBWD6Q4V339 395 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 DCAF17Q5H9S7 520 aaPredicted RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 CBWD3Q5JTY5 395 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 CBWD5Q5RIA9 395 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 TCERG1LQ5VWI1 586 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 BTBD8Q5XKL5 378 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 TMEM92Q6UXU6 159 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 TATDN2Q93075 761 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 HEXIM2Q96MH2 286 aaKnown RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 TSG101Q99816 390 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 DUSP9Q99956 384 aaKnown RBP21.79■■□□□ 1.08
LITAF-205ENST00000570904 DUSP16Q9BY84 665 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 CISHQ9NSE2 258 aa21.79■■□□□ 1.08
LITAF-205ENST00000570904 TRIM49BA6NDI0 452 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 SGK1O00141 431 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 TRIM24O15164 1050 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 STX10O60499 249 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 TULP3O75386 442 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 ZNF806P0C7X5 589 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 RARGP13631 454 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 GBP1P32455 592 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 MPLP40238 635 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 KIR2DL1P43626 348 aaPredicted RBP21.78■■□□□ 1.08
LITAF-205ENST00000570904 ELF2Q15723 593 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 COBLL1Q53SF7 1204 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 ANKRD40Q6AI12 368 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 HTR3DQ70Z44 454 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 RASSF3Q86WH2 238 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 C12orf50Q8NA57 414 aaPredicted RBP21.78■■□□□ 1.08
LITAF-205ENST00000570904 SLC4A11Q8NBS3 891 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 MDGA1Q8NFP4 955 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 CNOT6LQ96LI5 555 aaKnown RBP21.78■■□□□ 1.08
LITAF-205ENST00000570904 GSDMAQ96QA5 445 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 DNAI2Q9GZS0 605 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 RXFP3Q9NSD7 469 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.78■■□□□ 1.08
LITAF-205ENST00000570904 NAGPAQ9UK23 515 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 PCDHGA5Q9Y5G8 931 aa21.78■■□□□ 1.08
LITAF-205ENST00000570904 A0A0A0MRY4 1105 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 SLC16A3O15427 465 aaKnown RBP21.77■■□□□ 1.08
LITAF-205ENST00000570904 FOXD2O60548 495 aaPredicted RBP21.77■■□□□ 1.08
LITAF-205ENST00000570904 SMC2O95347 1197 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 TNFRSF4P43489 277 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 RAD23BP54727 409 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 NUCB2P80303 420 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 USP39Q53GS9 565 aaKnown RBP21.77■■□□□ 1.08
LITAF-205ENST00000570904 PLA2G2CQ5R387 149 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 C10orf120Q5SQS8 335 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 SCD5Q86SK9 330 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 ZC3H3Q8IXZ2 948 aaKnown RBP21.77■■□□□ 1.08
LITAF-205ENST00000570904 SMARCE1Q969G3 411 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 TMEM176AQ96HP8 235 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 DEC1Q9P2X7 70 aa21.77■■□□□ 1.08
LITAF-205ENST00000570904 LSM7Q9UK45 103 aaKnown RBP21.77■■□□□ 1.08
LITAF-205ENST00000570904 TBC1D3BA6NDS4 549 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 ADAM23O75077 832 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 RHOBTB1O94844 696 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 BCKDHBP21953 392 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 FKBP3Q00688 224 aaKnown RBP21.76■■□□□ 1.07
LITAF-205ENST00000570904 GOLGA8FQ08AF8 430 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 GOLGA8DPQ0D2H9 430 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 TPGS1Q6ZTW0 290 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 CCDC186Q7Z3E2 898 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 SPATA20Q8TB22 786 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 FAXDC2Q96IV6 333 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 DNMT3LQ9UJW3 386 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 USP3Q9Y6I4 520 aa21.76■■□□□ 1.07
LITAF-205ENST00000570904 NEDD8-MDP1E9PL57 170 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 ALDH1A2O94788 518 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 CREB5Q02930 508 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 HSF5Q4G112 596 aaPredicted RBP21.75■■□□□ 1.07
LITAF-205ENST00000570904 EOGTQ5NDL2 527 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 C10orf76Q5T2E6 689 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 TCEAL6Q6IPX3 200 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 KLHDC10Q6PID8 442 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 TTC39CQ8N584 583 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 TERB1Q8NA31 727 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 TCEAL3Q969E4 200 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 DNAJC17Q9NVM6 304 aaKnown RBP21.75■■□□□ 1.07
LITAF-205ENST00000570904 LAMA1P25391 3075 aa21.75■■□□□ 1.07
LITAF-205ENST00000570904 PMS2CLQ68D20 193 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 ARHGAP17Q68EM7 881 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 ISM2Q6H9L7 571 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 GRAMD4Q6IC98 578 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 MIB1Q86YT6 1006 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 ZNF513Q8N8E2 541 aaPredicted RBP21.74■■□□□ 1.07
LITAF-205ENST00000570904 BBS2Q9BXC9 721 aa21.74■■□□□ 1.07
LITAF-205ENST00000570904 POLMQ9NP87 494 aaPredicted RBP21.74■■□□□ 1.07
LITAF-205ENST00000570904 VPS45Q9NRW7 570 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms