RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NOS2P35228 1153 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 MATKP42679 507 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 SLC1A1P43005 524 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 PTPN9P43378 593 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 SULT1E1P49888 294 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 CDO1Q16878 200 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 MON1AQ86VX9 555 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 NIPA2Q8N8Q9 360 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 PSMG2Q969U7 264 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 TRMT2BQ96GJ1 504 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 CDCA3Q99618 268 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 NAPGQ99747 312 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 NMUR1Q9HB89 426 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 DPP7Q9UHL4 492 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 NAALADL1Q9UQQ1 740 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 HCFC2Q9Y5Z7 792 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
HERPUD1-219ENST00000570273 CTAGE9A4FU28 777 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 CCL16O15467 120 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 NCK2O43639 380 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 DNA2P51530 1060 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ATP11AP98196 1134 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RTL10Q7L3V2 364 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 DNAJB7Q7Z6W7 309 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 NT5DC3Q86UY8 548 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 OVCA2Q8WZ82 227 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF512Q96ME7 567 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 TBCBQ99426 244 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 NSUN3Q9H649 340 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ABCC13Q9NSE7 274 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 UXTQ9UBK9 157 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 PACSIN2Q9UNF0 486 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 JRKLQ9Y4A0 524 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ENC1O14682 589 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RFPL2O75678 378 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RNF8O76064 485 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 FYNP06241 537 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 GJC1P36383 396 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 PGFP49763 221 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 PSEN1P49768 467 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 DNTTIP2Q5QJE6 756 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 MEI1Q5TIA1 1274 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 DAB2IPQ5VWQ8 1189 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RSRC2Q7L4I2 434 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 BEND5Q7L4P6 421 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RNF139Q8WU17 664 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 FAM172AQ8WUF8 416 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 MYRFLQ96LU7 910 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 PRDM12Q9H4Q4 367 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 FAM204AQ9H8W3 233 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 OSER1Q9NX31 292 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 TRPM5Q9NZQ8 1165 aa16.11■□□□□ 0.17
HERPUD1-219ENST00000570273 SYNJ2BP-COX16A0A087WUM0 186 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 FANCGO15287 622 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 XYLBO75191 536 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 LRCH4O75427 683 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 RALAP11233 206 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 TFE3P19532 575 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 HOXA9P31269 272 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 PITX1P78337 314 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 ACAP1Q15027 740 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 RPS6KA1Q15418 735 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 SLC25A52Q3SY17 297 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 SH3PXD2AQ5TCZ1 1133 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 CC2D1AQ6P1N0 951 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 DQX1Q8TE96 717 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 IGFLR1Q9H665 355 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 CLIC5Q9NZA1 410 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 COX16Q9P0S2 106 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 ATG2AQ2TAZ0 1938 aa16.1■□□□□ 0.17
HERPUD1-219ENST00000570273 MYO7AQ13402 2215 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 MIF4GDA9UHW6 222 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 M0QYT0 321 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 ZDHHC11BP0C7U3 371 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 RARGP13631 454 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 CTNNA2P26232 953 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 RDXP35241 583 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 GTF2F1P35269 517 aaKnown RBP eCLIP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 TAS2R40P59535 323 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 ZNF697Q5TEC3 545 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 OTUD1Q5VV17 481 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 TAC4Q86UU9 113 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 ADAM32Q8TC27 787 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 CASP10Q92851 521 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 GCNAQ96QF7 691 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms