RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PRKAG1P54619 331 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 POLE2P56282 527 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 RNASE9P60153 205 aaKnown RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 HSD11B2P80365 405 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 SATB1Q01826 763 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
UBR1-211ENST00000569971 CUL4BQ13620 913 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 TRIM71Q2Q1W2 868 aaKnown RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 FBXO47Q5MNV8 452 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 ANKRD45Q5TZF3 282 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 MRNIPQ6NTE8 343 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 RASGRP3Q8IV61 690 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 AFAP1Q8N556 730 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 Q8NA96 180 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 PPHLN1Q8NEY8 458 aaKnown RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 ASB12Q8WXK4 309 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 MIEF2Q96C03 454 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 FAM227BQ96M60 508 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 PPM1MQ96MI6 270 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 MNTQ99583 582 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 PTDSS2Q9BVG9 487 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 TEX101Q9BY14 249 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 PABPC3Q9H361 631 aaKnown RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 TP63Q9H3D4 680 aaPredicted RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 TAF1DQ9H5J8 278 aaPredicted RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 CXorf36Q9H7Y0 433 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 GBA2Q9HCG7 927 aaPredicted RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 SAYSD1Q9NPB0 183 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 RIC8AQ9NPQ8 531 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 TMOD4Q9NZQ9 345 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 C11orf21Q9P2W6 132 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 ING1Q9UK53 422 aaPredicted RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 IQGAP1P46940 1657 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 LRPPRCP42704 1394 aaKnown RBP4.25□□□□□ -1.73
UBR1-211ENST00000569971 PARD3Q8TEW0 1356 aa4.25□□□□□ -1.73
UBR1-211ENST00000569971 ZNF518AQ6AHZ1 1483 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 KIAA1210Q9ULL0 1709 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 VWDEQ8N2E2 1590 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 NPIPB8E9PQR5 432 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 PCDH17O14917 1159 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 RHOBTB3O94955 611 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 GLP2RO95838 553 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 ANXA6P08133 673 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 HGFP14210 728 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 JUPP14923 745 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 KCNA2P16389 499 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 KLRK1P26718 216 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 CST5P28325 142 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 DDIT3P35638 169 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 PRKAA2P54646 552 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 BCAT1P54687 386 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 GEMIN4P57678 1058 aaKnown RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 LOXL3P58215 753 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 IRX6P78412 446 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 FAM110CQ1W6H9 321 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 ADCK5Q3MIX3 580 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 DCAF17Q5H9S7 520 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 INTS11Q5TA45 600 aaKnown RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 FOXR2Q6PJQ5 311 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 TMPRSS9Q7Z410 1059 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 MAATS1Q7Z4T9 603 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 HERC6Q8IVU3 1022 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 C1orf210Q8IVY1 113 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 SPARTQ8N0X7 666 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 NAXEQ8NCW5 288 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SIMC1Q8NDZ2 872 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 CPT1CQ8TCG5 803 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SPPL3Q8TCT6 385 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 CSGALNACT1Q8TDX6 532 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 AFG1LQ8WV93 481 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 TMEM171Q8WVE6 324 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SKA1Q96BD8 255 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 ZBTB45Q96K62 511 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 MED15Q96RN5 788 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SENP7Q9BQF6 1050 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 RTKNQ9BST9 563 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 DDX23Q9BUQ8 820 aaKnown RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 TRIM5Q9C035 493 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 RNPEPQ9H4A4 650 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 PRDM8Q9NQV8 689 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 PARPBPQ9NWS1 579 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 FEM1BQ9UK73 627 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 FBXO9Q9UK97 447 aaPredicted RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 NDRG4Q9ULP0 352 aaKnown RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 CA14Q9ULX7 337 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 EFCAB6Q5THR3 1501 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 ZMYM4Q5VZL5 1548 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 INSRP06213 1382 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 CLTCL1P53675 1640 aa4.24□□□□□ -1.73
UBR1-211ENST00000569971 SCAF11Q99590 1463 aaKnown RBP4.24□□□□□ -1.73
UBR1-211ENST00000569971 SYNMO15061 1565 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 LMTK2Q8IWU2 1503 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 E7ENX8 843 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 F5H697 171 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 TOR1BO14657 336 aa4.23□□□□□ -1.73
UBR1-211ENST00000569971 CD3EAPO15446 510 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms