RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 DOCK2Q92608 1830 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 KMT2BQ9UMN6 2715 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 RFX7Q2KHR2 1363 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GAKO14976 1311 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ZNF521Q96K83 1311 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PTPRFP10586 1907 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 A0A087WZ62 844 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 FAM170AA1A519 330 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CYP26A1O43174 497 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 DAPK3O43293 454 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GPR32O75388 356 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CIAO1O76071 339 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ACTL6BO94805 426 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 RTN3O95197 1032 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GASTP01350 101 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ZSCAN22P10073 491 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CYP2C8P10632 490 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 NPPBP16860 134 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 EGR1P18146 543 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 IL1R2P27930 398 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GUCY1A2P33402 732 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GMPRP36959 345 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ZEB1P37275 1124 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ARL4AP40617 200 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 AARSP49588 968 aaKnown RBP eCLIP3.55□□□□□ -1.844e-11■■□□□ 13.1
CNOT1-221ENST00000569924 DRG2P55039 364 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ACTR2P61160 394 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 IL13RA1P78552 427 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CD83Q01151 205 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PRKCQQ04759 706 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TCP10Q12799 353 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 MTM1Q13496 603 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CUL4BQ13620 913 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 KRT32Q14532 448 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 SURF1Q15526 300 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 MAPKAPK3Q16644 382 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ATP2B3Q16720 1220 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TRIM71Q2Q1W2 868 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 FAM26FQ5R3K3 315 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CFAP58Q5T655 872 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 HAUS3Q68CZ6 603 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 LMBRD2Q68DH5 695 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 VASNQ6EMK4 673 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 USP17L6PQ6QN14 398 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 LIPIQ6XZB0 460 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CCDC129Q6ZRS4 1044 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 KIAA0408Q6ZU52 694 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 USP49Q70CQ1 688 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CXXC5Q7LFL8 322 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ATG9AQ7Z3C6 839 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 KRT73Q86Y46 540 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 MIB1Q86YT6 1006 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 YAF2Q8IY57 180 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PDZD8Q8NEN9 1154 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 OR56A3Q8NH54 315 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 BCL7CQ8WUZ0 217 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ZNF480Q8WV37 535 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 AFG1LQ8WV93 481 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CASKIN2Q8WXE0 1202 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ST8SIA4Q92187 359 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CFHR4Q92496 578 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 NELL1Q92832 810 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TSPAN17Q96FV3 270 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 COG8Q96MW5 612 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TIGD1Q96MW7 591 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 WDR92Q96MX6 357 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ALPK1Q96QP1 1244 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TWSG1Q9GZX9 223 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PAIP1Q9H074 479 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PABPC3Q9H361 631 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 SEMA6BQ9H3T3 888 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 LDAHQ9H6V9 325 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 CARS2Q9HA77 564 aaKnown RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TNFRSF12AQ9NP84 129 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PAK6Q9NQU5 681 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TMEM140Q9NV12 185 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 SLAMF8Q9P0V8 285 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 SAE1Q9UBE0 346 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-221ENST00000569924 TRPS1Q9UHF7 1281 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 DNAI1Q9UI46 699 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 GABRQQ9UN88 632 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 HDAC5Q9UQL6 1122 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 ZHX2Q9Y6X8 837 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 DOCK1Q14185 1865 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 PHIPQ8WWQ0 1821 aa3.55□□□□□ -1.84
CNOT1-221ENST00000569924 DOCK3Q8IZD9 2030 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 COL2A1P02458 1487 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-221ENST00000569924 TRANK1O15050 2925 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 MYH2Q9UKX2 1941 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 LOC285556D6RIA3 1793 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 CNTNAP5Q8WYK1 1306 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 GPR75-ASB3A0A0A6YYF3 556 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 FITM1A5D6W6 292 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 SYNDIG1LA6NDD5 238 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 DDTLA6NHG4 134 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-221ENST00000569924 PRSS29PA6NIE9 313 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 FCHO1O14526 889 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 TOR1BO14657 336 aa3.54□□□□□ -1.84
CNOT1-221ENST00000569924 TNPO2O14787 897 aaKnown RBP3.54□□□□□ -1.84
CNOT1-221ENST00000569924 N4BP3O15049 544 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms